Query= MSMg01no361_o07.b1 MSMg01no361_o07.b1 CHROMAT_FILE:
MSMg01no361_o07.b1 PHD_FILE: MSMg01no361_o07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:04 2005
(456 letters)
>mm_chr8_17857260_17858115
Length = 856
Score = 837 bits (433), Expect = 0.0
Identities = 448/453 (98%)
Strand = Plus / Plus
Query: 4 ggaattccccccgccgccattctgacattgatgccacatcatccatggtctgcttgtatc 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccccccgcccccattctgacattgatgccacatcatccatggtctgcttgtatc 263
Query: 64 tgagcactgactctccgacatctttcagttcttctttgcttcctttgaaagcctccaagc 123
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgagcactgactctccgaaatctttcagttcttctttgcttcctttgaaagcctccaagc 323
Query: 124 taaggtttccacatttcggtgattcctgactttctccttatccttcccacttctgcttca 183
|| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 324 tatggtttccacatttcagtgattcctgactttctccttatccttcccacttatgcttca 383
Query: 184 tcttttttattatggcacctgtccttaaatgacaggtacaacttcatttacggcaacatg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcttttttattatggcacctgtccttaaatgacaggtacaacttcatttacggcaacatg 443
Query: 244 attgagtagtgtctctcagactgagttcaatgagaatgtcagaggtgggcaggataagga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 attgagtagtgtctctcagactgagttcaatgagaatgtcagaggtgggcaggataagga 503
Query: 304 ccacttgataggtgataatgatgaggcagaggcttgaagaaagtgaaagaagatggaaat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ccacttgataggtgataatgatgaggcagaggcttgaagaaagtgaaagaagatggaaat 563
Query: 364 accctgaagcagcaactaagctgcagggactgatcttttaatatttattaatcataagac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 accctgaagcagcaactaagctgcagggactgatcttttaatatttattaatcataagac 623
Query: 424 aaaatgaagttttataaagcatggaaaatgtac 456
|||||||||||||||||||||||||||||||||
Sbjct: 624 aaaatgaagttttataaagcatggaaaatgtac 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_o07.g1 MSMg01no361_o07.g1 CHROMAT_FILE:
MSMg01no361_o07.g1 PHD_FILE: MSMg01no361_o07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:04 2005
(571 letters)
>mm_chr8_18001663_18002631
Length = 969
Score = 1062 bits (549), Expect = 0.0
Identities = 565/571 (98%), Gaps = 2/571 (0%)
Strand = Plus / Minus
Query: 1 aatggcttcttaaaaacttcagtgtgataaagccaatattcttgaaatccagaagcttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 aatggcttcttaaaaacttcagtgtgataaagccaatattcttgaaatccagaagcttaa 710
Query: 61 cagtccatcatttgagcattttctgagaaccgagaattaagaaatctactgggggaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 cagtccatcatttgagcattttctgagaaccgagaattaagaaatctactgggggaaatt 650
Query: 121 aaaatctgatgaaaagagtgctttcagctttttttttttctttctgtgtctctggcctta 180
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 649 aaaatctgatgaaaagagtgctttcag--ttttttttttctttctgtgtctctggcctta 592
Query: 181 ggccttactcattaccctggattttaaattttctaccagactccctactacaaaatcagc 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 591 ggccttactcattaccctggattttaaattttctatcagactccctactacaaaatcagc 532
Query: 241 tgggttctaatcaagccatttgcttgcacattgtccatcttttcatttattattttcctg 300
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 531 tgggttctaatcaagccatttgcttgcacactgtccatcttttcatttattattttcctg 472
Query: 301 caggttttggtcatttgcttgctttattctagaatcatgccagatcttgaacctaacaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 caggttttggtcatttgcttgctttattctagaatcatgccagatcttgaacctaacaag 412
Query: 361 agaagggaagaagaaaaatagtcgcagaactcagagatttaataatgcagtgcaaggaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 agaagggaagaagaaaaatagtcgcagaactcagagatttaataatgcagtgcaaggaat 352
Query: 421 gagagaacaacattttataaattctgagacttccaactcccagaatcatagcttgcagat 480
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 351 gagagaacaacattttataaattctgagacttccaactcccagaattatagcttgcagat 292
Query: 481 atgtagtgatagatgaagggcgagtgatggttaatgctacccttctctgggaaatcttga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 atgtagtgatagatgaagggcgagtgatggttaatgctacccttctctgggaaatcttga 232
Query: 541 tgtttccaagtgtgagatgtggcacaagtga 571
||||||||||| |||||||||||||||||||
Sbjct: 231 tgtttccaagtctgagatgtggcacaagtga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 969
Length adjustment: 10
Effective length of query: 561
Effective length of database: 959
Effective search space: 537999
Effective search space used: 537999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
