NNNTTCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCACCCCAGAGTTTGGCTGAGCCCTCCATCTGTTCTTTCCAGCA
AACATCTGAGCTCTAAATGGTTTTCATTGTCATGTTTCAAACATCATTTG
TTTGGCAGTTTGTTCTGCTCTTGCCTACTATAGCCTGGCTTTCCTCTTGC
TGTATATCACATGATGTACCTTAGGTGGCATTCTCTAAGTTTCACAGTAA
AAACTCAGACCCACGCACCGCAAATCTTATAGTGAGCCTTTCTTGCAAAC
TTGGGCTTTCCAGGTTTACAACAGCAGCTAAGACCACTGTAGTAAGTATT
ATCTCCCTAGGAGGACGGCAGGTAACAGGAGGGTCTCCTTTGCAGAAGCC
AGGAGTATTCCAAGTTCTCTTTGAAAGGTTAGACAAGAGTGTCAGATCCC
CTTAAGCTGAGGTTTTAGGGAGTTGTGAGCCACATGATGTGGGTGCTGGG
AACTGAACTCCATCCTCTGTAAGAACCGAAAGTGCTTTAACTGCTGAGTC
AGGTCCCACGCTCTGAGAAAGCGATTTTATATTCCAAACCCGGGTGTGGC
TGTAATTCCAAGCCCTGGCCAAAAATTCCAAAAGGCTTTAAAGTAATTAT
AAAGGGTGGCCCCCCTGGGGAAGGAGGGCCTTTTATCCCTCCCCCTCCCA
AAGCAAAACAAGCGGGAATCCTTCGATTTTATGTCTCTCTTTTCGTCTCA
ACCTGATTTTCTTATCATAAA

NNNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAAATGGGACCTAATGAAACT
CCAAAGTTTCTGCAAGGCAAAAGACACGGTCAATTAGACAAAAAGACCAC
CAAAAGGTTGGGAAAGGATCTTTACCTATCCTAAATCAAATAGGGGACTA
ATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAA
TAACCCCATTAAAAAATGGGGCTCAGAACTGAACAAAGAATTCTCACCTG
AGGAATACTGAATGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCTTA
ATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACC
AGTCAGAATGGCTAAGACCAAAATTCAGGTGACAGCAGATGCTGGCGTGG
ATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTG
TACAACCACTCTGGAAATCAGTCTGGCGGGTTCTCAGAAAATTGGACATA
GTACTACCGGAGGATCAGGCATACCTCCTCTGGGGCTATAATCCAGAAGA
TGGCCCCACTTGGTAGGAAGACAACATGCTCCCCTATGGTCATAGCAGGC
CTTTTTTTATATAACCAGAAACTGGGAAAGACCCCAAAGGCCCTCCCCCC
AAGGAATGGGTACGAAAAAGGGGGGGAATTTTCTCCACGGGAGGAGAACC
CCCCTTTTAAAAAAAAGATTTTTGAGTTCTTTTCCCACGGGA

Query= MSMg01no362_h23.b1 MSMg01no362_h23.b1 CHROMAT_FILE:
MSMg01no362_h23.b1 PHD_FILE: MSMg01no362_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:53 2005
         (442 letters)



>mm_chr8_79556729_79557570
          Length = 842

 Score =  847 bits (438), Expect = 0.0
 Identities = 438/438 (100%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaccccagagtttggctgagccctccatctgttctttccagcaaacatctgagct 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gaattcaccccagagtttggctgagccctccatctgttctttccagcaaacatctgagct 518

                                                                       
Query: 65  ctaaatggttttcattgtcatgtttcaaacatcatttgtttggcagtttgttctgctctt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ctaaatggttttcattgtcatgtttcaaacatcatttgtttggcagtttgttctgctctt 458

                                                                       
Query: 125 gcctactatagcctggctttcctcttgctgtatatcacatgatgtaccttaggtggcatt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gcctactatagcctggctttcctcttgctgtatatcacatgatgtaccttaggtggcatt 398

                                                                       
Query: 185 ctctaagtttcacagtaaaaactcagacccacgcaccgcaaatcttatagtgagcctttc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ctctaagtttcacagtaaaaactcagacccacgcaccgcaaatcttatagtgagcctttc 338

                                                                       
Query: 245 ttgcaaacttgggctttccaggtttacaacagcagctaagaccactgtagtaagtattat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ttgcaaacttgggctttccaggtttacaacagcagctaagaccactgtagtaagtattat 278

                                                                       
Query: 305 ctccctaggaggacggcaggtaacaggagggtctcctttgcagaagccaggagtattcca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ctccctaggaggacggcaggtaacaggagggtctcctttgcagaagccaggagtattcca 218

                                                                       
Query: 365 agttctctttgaaaggttagacaagagtgtcagatccccttaagctgaggttttagggag 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 agttctctttgaaaggttagacaagagtgtcagatccccttaagctgaggttttagggag 158

                             
Query: 425 ttgtgagccacatgatgt 442
           ||||||||||||||||||
Sbjct: 157 ttgtgagccacatgatgt 140


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space:   360689
Effective search space used:   360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)