Query= MSMg01no362_k17.b1 MSMg01no362_k17.b1 CHROMAT_FILE:
MSMg01no362_k17.b1 PHD_FILE: MSMg01no362_k17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:07 2005
(521 letters)
>mm_chr8_114106934_114107856
Length = 923
Score = 934 bits (483), Expect = 0.0
Identities = 511/521 (98%), Gaps = 3/521 (0%)
Strand = Plus / Plus
Query: 4 gaattctgtattgtcgtaaaagtgatcacaaagtccagagaggagtgtgagaagggaagt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattctgtattgtcgtaaaagtgatcacaaagtccagagaggagtgtgagaagggaagt 262
Query: 64 cagtcagctaagcttaggtgtgggaactttgagttggaacccaggacgggacctttagtt 123
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 263 cagtcagctaagcttaggtgtgggaactttgagttgaaacccaggacgggacctttagtt 322
Query: 124 ccagcactgcagaggcagaggctcaaggccaaccttatctagagagagaa-tccagggta 182
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 323 ccagcactgcagaggcagaggctcaaggccaaccttatctagagagagaattccagggca 382
Query: 183 catagaaatcttgtctcaaaaaaacaacacctcagaaccggtcaatggccctggttagca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 catagaaatcttgtctcaaaaaaacaacacctcagaaccggtcaatggccctggttagca 442
Query: 243 ctgcatcatttttacatataactctccacagtgttcacctcacctgggtcggaagcagca 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ctgcatcatttttacatataactctccacagtgttcacctcacctgggtcggaagcagca 502
Query: 303 ggtgcttgtccatcagtactgccctccacatcctaagctttccgtgtcccctgccccctt 362
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 503 ggtgcttgtccatcagtactgcccttcacatcctaagctttctgtgtcccctgccccctt 562
Query: 363 atccacagctcggacagtttgatgtaaaacctactatgctttcttccccgcagtcaaggt 422
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 563 atccacagctcggacagtttgatgtaaaacctactaagctttcttccccgcagtcaaggt 622
Query: 423 gtactcttgactcgatatttcaaactcttctctggccttgctgctggtagttgcaaaact 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gtactcttgactcgatatttcaaactcttctctggccttgctgctggtagttgcaaaact 682
Query: 483 tt--gtctagacccagtcagtggcgctggaaagatggctca 521
|| ||| ||||||||| |||||||||||||||||||||||
Sbjct: 683 ttatgtcaagacccagttagtggcgctggaaagatggctca 723
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 923
Length adjustment: 10
Effective length of query: 511
Effective length of database: 913
Effective search space: 466543
Effective search space used: 466543
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_k17.g1 MSMg01no362_k17.g1 CHROMAT_FILE:
MSMg01no362_k17.g1 PHD_FILE: MSMg01no362_k17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:08 2005
(432 letters)
>mm_chr8_114248416_114249248
Length = 833
Score = 791 bits (409), Expect = 0.0
Identities = 427/433 (98%), Gaps = 1/433 (0%)
Strand = Plus / Minus
Query: 1 ctaattgattccatgaaggagctggagtccgtaggatgctggtgggttttgatgtttggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 ctaattgattccatgaaggagctggagtccgtaggatgctggtgggttttgatgtttggt 574
Query: 61 tggtttagctttggcttgattgcaggttgtgtaccaccagcctggccaggggatggtttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tggtttagctttggcttgattgcaggttgtgtaccaccagcctggccaggggatggtttt 514
Query: 121 acttcttgagtctaagtagccaaggacacacagcaagtacccagagcctagtcccatttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 acttcttgagtctaagtagccaaggacacacagcaagtacccagagcctagtcccatttc 454
Query: 181 taagttcaggtctctctctgtcttcagatccaggaaacttaggagggaccttgtagctca 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 taagttcagatctctctctgtcttcagatccaggaaacttaggagggaccttgtagctca 394
Query: 241 cccataattaatgttcacccgatggccagaagagtgcatctgaccttcttgagtgcccaa 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 393 cccataattaatgttcacccgatggccagaagagtgcatctaaccttcttgagtgcccaa 334
Query: 301 tgggggtctcagtcagctttgctgaggcacacagccttctgata-ctctaagaggacaga 359
|||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 333 tgggggtctcagtcagctttgctgaggcacacagtcttctgataactctaagaggacaga 274
Query: 360 tgtcctagccacacccagaccagattcttgccttctccctgccctctgccttgtctaagg 419
|||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 273 tgtcctagccacacccagaccagattcttgccttcttcctgccctccgccttgtctaagg 214
Query: 420 cccgctcctggga 432
|||||||||||||
Sbjct: 213 cccgctcctggga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 833
Length adjustment: 9
Effective length of query: 423
Effective length of database: 824
Effective search space: 348552
Effective search space used: 348552
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
