Query= MSMg01no363_m20.b1 MSMg01no363_m20.b1 CHROMAT_FILE:
MSMg01no363_m20.b1 PHD_FILE: MSMg01no363_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:38 2005
(615 letters)
>mm_chr8_30633556_30634569
Length = 1014
Score = 650 bits (336), Expect = 0.0
Identities = 345/348 (99%), Gaps = 1/348 (0%)
Strand = Plus / Minus
Query: 268 aaatggagtcaaattttagtgaatggtgcaggtctagtttgattttctgcatattgaaat 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 aaatggagtcaaattttagtgaatggtgcaggtctagtttgattttctgcatattgaaat 955
Query: 328 tcaggttctcttattgtagacattgtcctttcttccatttatatttctggtgtctgaatc 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 tcaggttctcttattgtagacattgtcctttcttccatttatatttctggtgtctgaatc 895
Query: 388 aatgatagttgcagctgcatgcagttatatttagttccctagtctagttcatcgatctac 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 aatgatagttgcagctgcatgcagttatatttagttccctagtctagttcatcgatctac 835
Query: 448 gtgtctgtacaatgctgtttcactaagacagggattattaaatgggaatatcagtgccaa 507
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 834 gtgtctgtacaatgctgtttcactaagacagggattattaaatggaaatatcagtgccaa 775
Query: 508 gcacaggtctcatcctaattgcagttgtggattctcaatggaacaaactgataagatgaa 567
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 gcacaggtctcatcct-agtgcagttgtggattctcaatggaacaaactgataagatgaa 716
Query: 568 aatgtatgcatctatttactgaatcacttaataacaatagctagctgg 615
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 aatgtatgcatctatttactgaatcacttaataacaatagctagctgg 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1014
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1004
Effective search space: 607420
Effective search space used: 607420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_m20.g1 MSMg01no363_m20.g1 CHROMAT_FILE:
MSMg01no363_m20.g1 PHD_FILE: MSMg01no363_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:38 2005
(526 letters)
>mm_chr8_30388989_30389914
Length = 926
Score = 978 bits (506), Expect = 0.0
Identities = 521/526 (99%)
Strand = Plus / Plus
Query: 1 ttggaaaaaaacatttgggagacccagaaatgtcaccagtattcttctctgccaactgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttggaaaaaaacatttgggagacccagaaatgtcaccagtattcttctctgccaactgca 260
Query: 61 attattttctctgttgatttttatcatcttggtgatctatttatctaatgccaagctatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attattttctctgttgatttttatcatcttggtgatctatttatctaatgccaagctatc 320
Query: 121 ttgtcaggacaccctgtactgagttcagtggccatgtgtcctccatactctgagctggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtcaggacaccctgtactgagttcagtggccatgtgtcctccatactctgagctggct 380
Query: 181 ggtttcctctctccctggctgaaaccaagcttcatgctgatcaccctactggttcttcta 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 ggtttcctctctccctggctgaaaccaggcttcatgctgatcaccctactggttcttcta 440
Query: 241 gtataaacttccaagcctgccagtttctgagtctgctagtttcaggaggcccactccact 300
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaaaaacttccaagcctgccagtttctgagtctgctagtttcaggaggcccactccact 500
Query: 301 acttttctaaggagagagtcatcctattgatcatgggcaaaaagtaagagaatgtctgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acttttctaaggagagagtcatcctattgatcatgggcaaaaagtaagagaatgtctgct 560
Query: 361 tgtgaatgcccgtgaggatagaaaaagagtgcactttcttgttgaaatgaaacagaattt 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcgaatgcccgtgaggatagaaaaagagtgcactttcttgttgaaatgaaacagaattt 620
Query: 421 atgaggagcaggcagtgctggctcttgcttggcactgtgtaagaaagagcccagtatctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgaggagcaggcagtgctggctcttgcttggcactgtgtaagaaagagcccagtatctc 680
Query: 481 agtgtaggcagggatgagttccagttcgtttgggtgttgtgtgtga 526
|||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 681 agtgtaggcaggaatgagttccagttcgtttgggtgttgtgtgtga 726
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
