Query= MSMg01no365_i13.b1 MSMg01no365_i13.b1 CHROMAT_FILE:
MSMg01no365_i13.b1 PHD_FILE: MSMg01no365_i13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:03 2005
(467 letters)
>mm_chr8_100184597_100185463
Length = 867
Score = 880 bits (455), Expect = 0.0
Identities = 464/467 (99%)
Strand = Plus / Plus
Query: 1 aagggtcatgaaaagctttgcaagatcccatgtaatccaaaagtgtagagggctaattct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagggtcatgaaaagctttgcaagatcccatgtaatccaaaagtgtagagggctaattct 260
Query: 61 acgtagagagcattagacttggattggtccctccctgattctattgataatttgggaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acgtagagagcattagacttggattggtccctccctgattctattgataatttgggaatt 320
Query: 121 tcatctaccagtcttcccatgtccaccccttctccacttttacctcctcctctccccccc 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcatctaccagtcttcccgtgtccaccccttctccacttttacctcctcctctccccccc 380
Query: 181 caaaaaagaaaaatatggcagaaataaaaagaggaagaattaaaaacaaacaaaactcaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaaaaagaaaaatatggcagaaataaaaagaggaagaattaaaaacaaacaaaactcaa 440
Query: 241 gtctattttgtgtggtccattactcactgacatatcaaattactaagggcaagccactca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtctattttgtgtggtccattactcactgacatatcaaattactaagggcaagccactca 500
Query: 301 agattaggtgagtctttaccatctgcaacctagccaggagccatcaactttggaacacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agattaggtgagtctttaccatctgcaacctagccaggagccatcaactttggaacacaa 560
Query: 361 tatagggtggaggtggtgagggacagggatagctctctagtgttggttcttaggtgacat 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 561 tatagggtggaggtggtgagggacagggctagctctctagtgttggttcttaggtgacat 620
Query: 421 cattcatttgatttttgccagatgaatcctacatgcaactctcactg 467
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cattcatttgatttttgccagatgaatcctacatgcaactctcactg 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no365_i13.g1 MSMg01no365_i13.g1 CHROMAT_FILE:
MSMg01no365_i13.g1 PHD_FILE: MSMg01no365_i13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:03 2005
(534 letters)
>mm_chr8_100366384_100367317
Length = 934
Score = 775 bits (401), Expect = 0.0
Identities = 417/423 (98%), Gaps = 2/423 (0%)
Strand = Plus / Minus
Query: 1 ttaaacagaagaaatagtaaaaggtggtccattcagatgggtactacaacacaagtcatg 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 423 ttaaacagaagaaatagtaaaaggtggtccattcagctgggtactacaacacaagtcatg 364
Query: 61 gagtagcgacctactcaagaagagacagagcacaccatcaggctctgctgtgaaagggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gagtagcgacctactcaagaagagacagagcacaccatcaggctctgctgtgaaagggga 304
Query: 121 aaggtgaaggcagagaataaattagacaaaacattgtcaactccttctatcaccatctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aaggtgaaggcagagaataaattagacaaaacattgtcaactccttctatcaccatctaa 244
Query: 181 aaatttcagttcagcagggatcagaataatacttccctaatct--aaacctttattcttt 238
|||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||
Sbjct: 243 aaatttcagttcagcagggatcagaaaaatacttccctaatcttaaaacatttattcttt 184
Query: 239 gtatgcttacatttatgtctgtgcgtgttgagtgccagtagtgaccacaaggtgtcagag 298
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 183 gtatgcttacatttatgtctgtgcgtgtcgagtgccagtagtgaccacaaggtgtcagag 124
Query: 299 atcttttgaagctgaaattctaggctgttgggaaccattaaatatgggttctgaaaactc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 atcttttgaagctgaaattctaggctgttgggaaccattaaatatgggttctgaaaactc 64
Query: 359 aagtcagatcatctagaagagcagcatgtatgcgactaccacaccatctttcttgctcca 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 aagtcagatcatctagaagagcagcatgtatgcgactaccacaccatctttcttgctcca 4
Query: 419 agt 421
|||
Sbjct: 3 agt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
