Query= MSMg01no365_m07.b1 MSMg01no365_m07.b1 CHROMAT_FILE:
MSMg01no365_m07.b1 PHD_FILE: MSMg01no365_m07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:21 2005
(553 letters)
>mm_chr8_6786065_6787017
Length = 953
Score = 1054 bits (545), Expect = 0.0
Identities = 551/553 (99%)
Strand = Plus / Minus
Query: 1 gtctattaaccactaagtgaatttataactaaaaacagtacaaaataagggtcaggacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 gtctattaaccactaagtgaatttataactaaaaacagtacaaaataagggtcaggacta 694
Query: 61 ccattgtacaattgcataatctcacggaactaaaaatgcaaaaattcatgtagttgacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 ccattgtacaattgcataatctcacggaactaaaaatgcaaaaattcatgtagttgacag 634
Query: 121 aaatgggatgttcaaaagtatgaatgtataaattattgactgtttttatagcaaattatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 aaatgggatgttcaaaagtatgaatgtataaattattgactgtttttatagcaaattatc 574
Query: 181 taatgttaaaaatgatcataagtaagaatatttagtcaggttaaaataatatgtcatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 taatgttaaaaatgatcataagtaagaatatttagtcaggttaaaataatatgtcatgtt 514
Query: 241 taaactctataatatatcatttcttttaatcatcagaaaataataccatgttcaagaaat 300
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 taaactctataagaaatcatttcttttaatcatcagaaaataataccatgttcaagaaat 454
Query: 301 acgatttgataattcttcctttaatctttcagtttttaagttcaagtaatatgttttgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 acgatttgataattcttcctttaatctttcagtttttaagttcaagtaatatgttttgta 394
Query: 361 atttaaaacatttatcaatgtcaaaattggaatattaattattatgatatgctttcgtcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 atttaaaacatttatcaatgtcaaaattggaatattaattattatgatatgctttcgtcc 334
Query: 421 attctttagactactcactactatgtatattcactgggatatgcctatatgaatattcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 attctttagactactcactactatgtatattcactgggatatgcctatatgaatattcag 274
Query: 481 gagataacatcaggagatctgtttctccttttacttttaagtaatattcacattatttga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gagataacatcaggagatctgtttctccttttacttttaagtaatattcacattatttga 214
Query: 541 tttttgaatatgt 553
|||||||||||||
Sbjct: 213 tttttgaatatgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no365_m07.g1 MSMg01no365_m07.g1 CHROMAT_FILE:
MSMg01no365_m07.g1 PHD_FILE: MSMg01no365_m07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:21 2005
(480 letters)
>mm_chr8_6604069_6604948
Length = 880
Score = 920 bits (476), Expect = 0.0
Identities = 479/480 (99%)
Strand = Plus / Plus
Query: 1 atttcattcactaaaatcaagagcccagaaatcacttctagcttaaaattgtattttccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttcattcactaaaatcaagagcccagaaatcacttctagcttaaaattgtattttccc 260
Query: 61 cttaggatcaggacacagatttgatgaatgttctcaagttattcacccatacaggacttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttaggatcaggacacagatttgatgaatgttctcaagttattcacccatacaggacttc 320
Query: 121 ttgaacactgctctgacattgagtactgtctgtgtaacttaatgttataaaacctggaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgaacactgctctgacattgagtactgtctgtgtaacttaatgttataaaacctggaag 380
Query: 181 gcatatttatagcccggtccagatggaccaaaacaaagtacaattattccttcaaaagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcatatttatagcccggtccagatggaccaaaacaaagtacaattattccttcaaaagcc 440
Query: 241 gacctttgcatacagattaaaatggactgcttccaagactcaaatggagaaatgaactca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacctttgcatacagattaaaatggactgcttccaagactcaaatggagaaatgaactca 500
Query: 301 gtcctccaattgcggtgcattcattacagccccattggactcagtgctggacagtgctaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtcctccaattgcggtgcattcattacagccccattggactcagtgctggacagtgctaa 560
Query: 361 ttagtggcatgtctgtgttaaaagttggactcagagctggctttgccaagtggcagcggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttagtggcatgtctgtgttaaaagttggactcagagctggctttgccaagtggcagcggg 620
Query: 421 aagaactgttatgaagctaattacagctatcagagatgggtctattttaaacaggctgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 621 aagaactgttatgaagctaattacagctatcagagatgggtctattttaaacaggatgtg 680
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
