Query= MSMg01no367_e04.b1 MSMg01no367_e04.b1 CHROMAT_FILE:
MSMg01no367_e04.b1 PHD_FILE: MSMg01no367_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:21 2005
(321 letters)
>mm_chr8_10911388_10912105
Length = 718
Score = 565 bits (292), Expect = e-165
Identities = 307/312 (98%), Gaps = 3/312 (0%)
Strand = Plus / Minus
Query: 8 gaattcttagattatcgttgtgcactattgccccacataggatccaggctttttgtatct 67
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gaattcttagattatagttgtgcactattgccccacataggatccaggctttttgtatct 457
Query: 68 aacatgaactccatcactgctataaggccagtccggactggcttcttccccctgctcaat 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aacatgaactccatcactgctataaggccagtccggactggcttcttccccctgctcaat 397
Query: 128 ttggatatttgttctatccatgccctggaagagttctcaggaaacatagtcctgattctc 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ttggatatttgttctatccatgccctggaagagttctcaggaaacatagtcctgattctc 337
Query: 188 ccatgatgngtacaggaatcaaaggtgaaagaggaactctcgggttagaactgaagtctt 247
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ccatgatg-g-acaggaatcaaaggtgaaagaggaactctcgggttagaactgaagtctt 279
Query: 248 cctcccatattggaaacaagcctgccgggttggtctgaactccagcctggcttagctccc 307
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 278 cctcccatattggaaacaagcctgcggggttggtctgaactccagcctggcttagctccc 219
Query: 308 tgcccctctgcc 319
|| |||||||||
Sbjct: 218 tg-ccctctgcc 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 718
Length adjustment: 9
Effective length of query: 312
Effective length of database: 709
Effective search space: 221208
Effective search space used: 221208
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_e04.g1 MSMg01no367_e04.g1 CHROMAT_FILE:
MSMg01no367_e04.g1 PHD_FILE: MSMg01no367_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:21 2005
(359 letters)
>mm_chr8_10745676_10746434
Length = 759
Score = 640 bits (331), Expect = 0.0
Identities = 352/359 (98%)
Strand = Plus / Plus
Query: 1 tttaaaagtccttttctcagttctcatggcagtctctccttctacctgtttccctttgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaaaagtccttttctcagttctcatggcagtctctccttctacctgtttccctttgtc 260
Query: 61 acgggttcccagctcccatcctggcaacctccctgctcccaattccttttgtcaaatggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acgggttcccagctcccatcctggcaacctccctgctcccaattccttttgtcaaatggg 320
Query: 121 cttgctaacagtagggctggaccatctgattgaagccctatcttttctgcgtttctgact 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttgctaacagtagggttggaccatctgattgaagccctatcttttctgcgtttctgact 380
Query: 181 cacagtggaaagtctcacttgccaacgactacatggctttgggtaaaatatttggttcta 240
||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||
Sbjct: 381 cacagtggaaagtctcacttgccaatgattacatggctttgggtaaaatatttgattcta 440
Query: 241 tttactcgtgaccaactccaaaaatttacatgaaaattgttttactgtttttctgaataa 300
||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||
Sbjct: 441 tttactcgtgaccaactccaaaaatttacatgaaagttgttttgccgtttttctgaataa 500
Query: 301 acaatcataatgattaaggagataaacttgttgctcaaacctgagtcactacaaaaagg 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaatcataatgattaaggagataaacttgttgctcaaacctgagtcactacaaaaagg 559
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 759
Length adjustment: 9
Effective length of query: 350
Effective length of database: 750
Effective search space: 262500
Effective search space used: 262500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
