Query= MSMg01no367_i19.b1 MSMg01no367_i19.b1 CHROMAT_FILE:
MSMg01no367_i19.b1 PHD_FILE: MSMg01no367_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:45 2005
(508 letters)
>mm_chr8_115521076_115521984
Length = 909
Score = 505 bits (261), Expect = e-147
Identities = 332/387 (85%), Gaps = 52/387 (13%)
Strand = Plus / Minus
Query: 174 cctttataacatttatgtacatacataatatacatatatgtatatgtttattcctttaaa 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 cctttataacatttatgtacatacataatatacatatatgtatatgtttattcctttaaa 850
Query: 234 acaccataacatatgtat----acacacacacacacacacacacacacacatatatatgt 289
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 849 acaccataacatatgtatacacacacacacacacacacacacacacacacatatatatat 790
Query: 290 atgtatatgtatat--------------------------acat-g-------------- 308
|| ||||| ||||| |||| |
Sbjct: 789 atatatatatatatatatatatatatatatatacacacacacatagatatatacacacac 730
Query: 309 ------atatgtatatatatcactaaggcattatagtttgttatggctagcttatattga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 atatatatatgtatatatatcactaaggcattatagtttgttatggctagcttatattga 670
Query: 363 atgtaggcta-cccccccccttgagttgcctgtctcagtctttagatgtttttacaactt 421
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 atgtaggctaccccccccccttgagttgcctgtctcagtctttagatgtttttacaactt 610
Query: 422 gtgtactgaatagcttctcaaatagactttctcaagcttaatcttgttggtaataaacac 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gtgtactgaatagcttctcaaatagactttctcaagcttaatcttgttggtaataaacac 550
Query: 482 ttttgacaatattatatatcacttctc 508
|||||||||||||||||||||||||||
Sbjct: 549 ttttgacaatattatatatcacttctc 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 62
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 909
Length adjustment: 10
Effective length of query: 498
Effective length of database: 899
Effective search space: 447702
Effective search space used: 447702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_i19.g1 MSMg01no367_i19.g1 CHROMAT_FILE:
MSMg01no367_i19.g1 PHD_FILE: MSMg01no367_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:45 2005
(550 letters)
>mm_chr8_115386887_115387836
Length = 950
Score = 1017 bits (526), Expect = 0.0
Identities = 544/550 (98%)
Strand = Plus / Plus
Query: 1 cacagatatgtaaatgaggcaggttaataaaaatttatttttaaattcaattttaagtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacagatatgtaaatgaggcaggttaataaaaatttatttttaaattcaattttaagtaa 260
Query: 61 aattgaaactccgcctacattttcattatgagaccaagtcaacaactgtaagtagcagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattgaaactccgcctacattttcattatgagaccaagtcaacaactgtaagtagcagca 320
Query: 121 gcaagaaaatcgtagccataatccatcccattcttattttagctgtagggctaatttctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaagaaaatcgtagccataatccatcccattcttattttagctgtagggctaatttctt 380
Query: 181 ccctgttacttcatgactctgtgctatggggcaaatagatggggagcactgagaccccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccctgttacttcatgactctgtgctatggggcaaatagatggggagcactgagaccccaa 440
Query: 241 gacaaaggcacggtgaggcacaggggaggtaccaggagatgaagccacaccctgagctga 300
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 gacaaaggcacggtgaggcataggggaggtaccaggagatggagccacaccctgagctga 500
Query: 301 ggacagtctgttgaaaaccttacttgataagcaaagtcaaagaggtctaccactgagcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggacagtctgttgaaaaccttacttgataagcaaagtcaaagaggtctaccactgagcct 560
Query: 361 aggtgtacatgggtaattctattcatacaactaaaggttagcatcccatcttctttcaga 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagtgtacatgggtaattctattcatacaactaaaggttagcatcccatcttctttcaga 620
Query: 421 ttgtattcttattagactatagtctgtcattgagaggaaacatgaatctatatcacattc 480
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 621 ttgtattcttattagactatagtctgtcattgagaggaaacatgaacctatatcacattc 680
Query: 481 ttgatatcaagaatatatatgaagaaggctttctgtgcatgatatccctcaaaccatagt 540
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttgatatcaagaagatatatgaagaaggctttctgtgcatgatatccctcaaaccatagt 740
Query: 541 acaaactaat 550
||||| ||||
Sbjct: 741 acaaagtaat 750
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
