Query= MSMg01no367_o15.b1 MSMg01no367_o15.b1 CHROMAT_FILE:
MSMg01no367_o15.b1 PHD_FILE: MSMg01no367_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:12 2005
(559 letters)
>mm_chr8_82459818_82460776
Length = 959
Score = 1027 bits (531), Expect = 0.0
Identities = 549/555 (98%)
Strand = Plus / Minus
Query: 5 gaattccaaagtatcatttcatgtaactcaagctccgtttacccgagagtgacgctgctc 64
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 gaattccaaaggattatttcatgtaactcaagctccgtttacccgagagtgacgctgctc 700
Query: 65 acaactgcccgaagaaaaactaagagctttatagcaactccacctatcccttttgcgccc 124
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 699 acaactgcccgaagaaaaactaagagctttatggcaactccacctatcccttttgtgccc 640
Query: 125 gtttgttttcagatagatgggaaaatattttccacttgtatttgatgacaaaatttccac 184
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 639 gtttgttttcagatagatgggaaaatattttccacttgtatttgatgacacaatttccac 580
Query: 185 agtgtcttgcctaatcttcaattcatcaagatcacctcaaatgtcactcccatggaatca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 agtgtcttgcctaatcttcaattcatcaagatcacctcaaatgtcactcccatggaatca 520
Query: 245 tgagcccaaagatcatttttcattatcacaaacatttagaaaaaaaaatcatccttttga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tgagcccaaagatcatttttcattatcacaaacatttagaaaaaaaaatcatccttttga 460
Query: 305 ttaggtgatccatagaagagtggaagcagtttcctttctcttagttttagtacttgaccc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ttaggtgatccatagaagagtggaagcagtttcctttctcttagttttagtacttgaccc 400
Query: 365 cacctgaaagttactcctttttatttccttttaaccattcttctttcaccagggtcaaac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 cacctgaaagttactcctttttatttccttttaaccattcttctttcaccagggtcaaac 340
Query: 425 accccctacctcttagaggagtactgcctgcagactcctccttgaccattgcaagtagag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 accccctacctcttagaggagtactgcctgcagactcctccttgaccattgcaagtagag 280
Query: 485 aggaaagattctagcttttgtcattccaaagctgagcgtgtatatctccttccttctgaa 544
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 279 aggaaagattctagcttttgtcattccaaagctgagtgtgtatatctccttccttctgaa 220
Query: 545 aacaagaaaacacag 559
|||||||||||||||
Sbjct: 219 aacaagaaaacacag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space: 521001
Effective search space used: 521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_o15.g1 MSMg01no367_o15.g1 CHROMAT_FILE:
MSMg01no367_o15.g1 PHD_FILE: MSMg01no367_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:12 2005
(535 letters)
>mm_chr8_82293977_82294911
Length = 935
Score = 1015 bits (525), Expect = 0.0
Identities = 534/539 (99%), Gaps = 4/539 (0%)
Strand = Plus / Plus
Query: 1 ctgtttatcttaacactggaaaagttatatcttgatgccatggacctttttatataaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ctgtttatcttaacactggaaaagttatatcttgatgccatggacctttttatataaagt 256
Query: 61 aaagattaaaatgtgtaagatggctcagcaattaagagcactg----ctcttcagtggac 116
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 257 aaagattaaaatgtgtaagatggctcagcaattaagagcactggttgctcttcagtggac 316
Query: 117 ctgaattcgatgcccagcacgtacatcactgttcacaactatctgtaactccagttgcag 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ctgaattcgatgcccagcacgtacatcactgttcacaactatctgtaactccagttgcag 376
Query: 177 gggatccaacaccctcttctggcttttgtggatatcaggcatgcgcgtgctacacagcca 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gggatccaacaccctcttctggcttttgtggatatcaggcatgcgcgtgctacacagcca 436
Query: 237 tccaagcagactaaatacaaaatgcccacatacttaaagttaattaaaataaacactata 296
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tccaagcagacaaaatacaaaatgcccacatacttaaagttaattaaaataaacactata 496
Query: 297 ccttatggatccactgcaaggctgaactgtcagtccatatacattttaaaggaatgcctg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ccttatggatccactgcaaggctgaactgtcagtccatatacattttaaaggaatgcctg 556
Query: 357 gtagagtaaggaccccccaaagtagaaagtcataaattgagaaaactgtaatgtggtcag 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gtagagtaaggaccccccaaagtagaaagtcataaattgagaaaactgtaatgtggtcag 616
Query: 417 ccttgtttgatggatgtctcttactcacccctaggtcagtcccattgtctttctcctcag 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ccttgtttgatggatgtctcttactcacccctaggtcagtcccattgtctttctcctcag 676
Query: 477 tccctttcagaagtccgcatttccataatgtgtttttgtattgtaatatcacatcataa 535
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tccctttcagaagtccgcatttccataatgtgtttttgtattgtaatatcacatcataa 735
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space: 485625
Effective search space used: 485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
