Query= MSMg01no368_m09.b1 MSMg01no368_m09.b1 CHROMAT_FILE:
MSMg01no368_m09.b1 PHD_FILE: MSMg01no368_m09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:19 2005
(584 letters)
>mm_chr8_101826247_101827231
Length = 985
Score = 1054 bits (545), Expect = 0.0
Identities = 575/585 (98%), Gaps = 1/585 (0%)
Strand = Plus / Minus
Query: 1 attattaaatttcccccacatgaaggtgtttggaaaagggaggtgaatagatctgttcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 attattaaatttcccccacatgaaggtgtttggaaaagggaggtgaatagatctgttcta 726
Query: 61 tgctatgtatttgacatattttgttttattaatacaaagctttaaagcaagattggttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 tgctatgtatttgacatattttgttttattaatacaaagctttaaagcaagattggttta 666
Query: 121 ttgtaaaacttgaatggcttacctatgcttatgcattgaaaatctggactcagatattgt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 665 ttgtaaaacttgaatggcttacctatgcttatgcattgaaaatctggactcagatattat 606
Query: 181 aaatccaccagtttcctttccctctaatcactgttatgattaagaaaaatgatgatcagt 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 aaatccaacagtttcctttccctctaatcactgttatgattaagaaaaatgatgatcagt 546
Query: 241 gactctgatg-ctaatgttccagaagtgctctttattaacaaacaccctggaatatcttc 299
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gactctgatgccaaatgttccagaagtgctctttattaacaaacaccctggaatatcttc 486
Query: 300 atattggtagaaaggacaagttatttggaaaggaaagtccaagtcataagttttaagact 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 atattggtagaaaggacaagttatttggaaaggaaagtccaagtcataagttttaagact 426
Query: 360 ctttttagacatgagtgaatcagtgctctctcacagaccaacatcagcattctaagaaat 419
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 425 ctttttagacatgagtgaatcagtgctctcttacagaccaacatcagcattctaagaaat 366
Query: 420 gatcatatgaaacaacacatcagaatgttttataaaagtaaatatcgtatgtgaaggaga 479
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 365 tatcatatgaaacaacacatcagaatgttttataaaggtaaatatcgtatgtgaaggaga 306
Query: 480 ttcctgcagaattgtgaaaccttggacacgtgcttttgctcattataaaatatgttatta 539
||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 305 ttcctacagaattgtgaaaccttggacatgtgcttttgctcattaaaaaatatgttatta 246
Query: 540 cttccaaatgagtgactgggacaggagacagtgtatttttccaaa 584
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 cttccaaatgagtgactgggacaggagacagtgtatttttccaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 985
Length adjustment: 10
Effective length of query: 574
Effective length of database: 975
Effective search space: 559650
Effective search space used: 559650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_m09.g1 MSMg01no368_m09.g1 CHROMAT_FILE:
MSMg01no368_m09.g1 PHD_FILE: MSMg01no368_m09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:19 2005
(567 letters)
>mm_chr8_101638492_101639458
Length = 967
Score = 988 bits (511), Expect = 0.0
Identities = 553/567 (97%)
Strand = Plus / Plus
Query: 1 tgagttgagcataagggtccaatatcacagaatttctgttctttttcttttttgttattt 60
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 tgagttgagcataagggcccaatatcaaagaatttctgttctttttcttttttgttattt 260
Query: 61 gttttttcttctaagatacttttgcagaatccatacagtctgtggcaaatctgacccatg 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttttccttctaagatacttttgcagaatccatacagtctgtggcaaatctgacccatg 320
Query: 121 tctgcacctgcattttcagacgaatgttcttgtatttttcttatgtcatattttcactca 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgcacctgcattttcagacaaatgttcttgtatttttcttatgtcatattttcactca 380
Query: 181 aggcccattagaaacattaccttcttaaaatctacactaaccatcaccatcgtccctgtc 240
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 381 aggcccattagaaacattaccttcttaaaatctacactaaccattaccattgtccctgtc 440
Query: 241 tcatattccgtctgcctatagaactcacaagaaatgttaaaatatatcaaagtatccaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcatattccgtctgcctatagaactcacaagaaatgttaaaatatatcaaagtatccaat 500
Query: 301 ttttgtctgatagttctagcatttgtacacttatggttagattcaaggcacagtgaagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttgtctgatagttctagcatttgtacacttatggttagattcaaggcacagtgaagaa 560
Query: 361 atgactcctatatgctaaagccataacatgtgaaaggaacattatttctgatgtgacaga 420
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acgactcctatatgctaaaaccataacatgtgaaaggaacattatttctgatgtgacaga 620
Query: 421 gacacttttccgggttgatgtctaaacatattgttttaattgtcaccattcaatccaata 480
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gacacttttccgggttgaggtctaaacatattgttttaattgtcaccattcaatccaata 680
Query: 481 catagtctccttactaaagctaggatatttgtaatgaattagagttacattggtacacta 540
||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 681 tgtagtctccttactaaagctaggatatttgtaatgaattagagtgacattggtactcta 740
Query: 541 taattatattctacatctctcatagaa 567
|||||||||||||| ||||||||||||
Sbjct: 741 taattatattctacgtctctcatagaa 767
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space: 533049
Effective search space used: 533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
