Query= MSMg01no369_a08.b1 MSMg01no369_a08.b1 CHROMAT_FILE:
MSMg01no369_a08.b1 PHD_FILE: MSMg01no369_a08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:38 2005
(318 letters)
>mm_chr8_41767069_41767785
Length = 717
Score = 586 bits (303), Expect = e-172
Identities = 312/315 (99%), Gaps = 1/315 (0%)
Strand = Plus / Minus
Query: 4 ggaattccctctgttccaatgactcaataagatgcaatccataaaagtttttaattagaa 63
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ggaattccctctg-gccaatgactcaataagatgcaatccataaaagtttttaattagaa 459
Query: 64 aagtaagaagttacctaaatttcttcagattatgaaaagtgggaatatggtagttctcat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aagtaagaagttacctaaatttcttcagattatgaaaagtgggaatatggtagttctcat 399
Query: 124 atttattgaatgataaatgtgtattttcctgacctattatagattgctgggatcttctat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 atttattgaatgataaatgtgtattttcctgacctattatagattgctgggatcttctat 339
Query: 184 cagtggtttataatacacattaggatctctcacaccaggatgctgtgtggtaaattgcat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 cagtggtttataatacacattaggatctctcacaccaggatgctgtgtggtaaattgcat 279
Query: 244 taaatcttaaagattattttgacaactcattatatttttctattctgtgttggttgaagt 303
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 278 taaatcttaaagattattttgacaactcattagatttttctattctgtgttggttgaagt 219
Query: 304 tgaagaagtgaagct 318
|||||||||||||||
Sbjct: 218 tgaagaagtgaagct 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 717
Length adjustment: 9
Effective length of query: 309
Effective length of database: 708
Effective search space: 218772
Effective search space used: 218772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no369_a08.g1 MSMg01no369_a08.g1 CHROMAT_FILE:
MSMg01no369_a08.g1 PHD_FILE: MSMg01no369_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:38 2005
(450 letters)
>mm_chr8_41592764_41593613
Length = 850
Score = 870 bits (450), Expect = 0.0
Identities = 450/450 (100%)
Strand = Plus / Plus
Query: 1 tccaatgggtcttgcaacaacgcctggaaactcggtgtcctgtaaaataattgataattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccaatgggtcttgcaacaacgcctggaaactcggtgtcctgtaaaataattgataattg 260
Query: 61 tttactaaatggtcataaatacaacccataaactctcaggaaatttttgatacaagtcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttactaaatggtcataaatacaacccataaactctcaggaaatttttgatacaagtcag 320
Query: 121 agaattctatgacaatgaaattctgtatgttcacactcaatgcttattttataagcatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaattctatgacaatgaaattctgtatgttcacactcaatgcttattttataagcatga 380
Query: 181 acagcattacctatcagacctcaatattctataaacttaaattactttttcttgaaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagcattacctatcagacctcaatattctataaacttaaattactttttcttgaaattt 440
Query: 241 atccataaattactatcctgtactgataactcataataaactcaggcaaatatttgggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atccataaattactatcctgtactgataactcataataaactcaggcaaatatttgggct 500
Query: 301 atttccaaggaaaagaaaaatcataaactgattcctaaggagtaggcatatgaaactaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttccaaggaaaagaaaaatcataaactgattcctaaggagtaggcatatgaaactaca 560
Query: 361 cttatagcattacattactaaactcaacccgcatgaaagattgatttaaaagttaaaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttatagcattacattactaaactcaacccgcatgaaagattgatttaaaagttaaaaag 620
Query: 421 taccctgtgctttccaatcaaagcagtgag 450
||||||||||||||||||||||||||||||
Sbjct: 621 taccctgtgctttccaatcaaagcagtgag 650
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
