Query= MSMg01no370_e24.b1 MSMg01no370_e24.b1 CHROMAT_FILE:
MSMg01no370_e24.b1 PHD_FILE: MSMg01no370_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:19 2005
(458 letters)
>mm_chr8_10493107_10493964
Length = 858
Score = 862 bits (446), Expect = 0.0
Identities = 452/454 (99%)
Strand = Plus / Plus
Query: 5 gaattctaccacatgttttaaaagaaaattagtaccaacttcatgcagtctgatccagaa 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaccaaatgttttaaaagaaaattagtaccaacttcatgcagtctgatccagaa 264
Query: 65 aatagaagacagaatgcttactgatttgtttgacaaagctagcattgccctgcacccaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatagaagacagaatgcttactgatttgtttgacaaagctagcattgccctgcacccaaa 324
Query: 125 atcagaaaaagctaaaacacatacatgtgcgcacacacaccaaaaatcagtccttcaaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atcagaaaaagctaaaacacatacatgtgcgcacacacaccaaaaatcagtccttcaaaa 384
Query: 185 actaaatcggatagatgttcaaaaaaaatagcagaccagattcatatatatctgtgtgtg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 385 actaaatcggatagatgttcaaaaaaaatagcagaccagattcatatatatctctgtgtg 444
Query: 245 tgtgtatagtataatataatagtgtaataatgtatatttttactatggccagtcaatgct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtgtatagtataatataatagtgtaataatgtatatttttactatggccagtcaatgct 504
Query: 305 ttccaaaatgtaagtactttcaatatttgaaaattattcaagataatccagaatattaat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttccaaaatgtaagtactttcaatatttgaaaattattcaagataatccagaatattaat 564
Query: 365 aagctaaagaagaaaaattatgtcatttattaatgggtgcagaaaaaaaattcgataaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagctaaagaagaaaaattatgtcatttattaatgggtgcagaaaaaaaattcgataaaa 624
Query: 425 ttcaacatacatttacagcaagcattctaagaag 458
||||||||||||||||||||||||||||||||||
Sbjct: 625 ttcaacatacatttacagcaagcattctaagaag 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_e24.g1 MSMg01no370_e24.g1 CHROMAT_FILE:
MSMg01no370_e24.g1 PHD_FILE: MSMg01no370_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:19 2005
(219 letters)
>mm_chr8_10683546_10684165
Length = 620
Score = 383 bits (198), Expect = e-111
Identities = 213/218 (97%), Gaps = 1/218 (0%)
Strand = Plus / Minus
Query: 1 tccaggtgtttacctgcagaccccagaccttttgcatacacagggagactcctgaagttt 60
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 418 tccaggtatttacctgcagaccccagatcttttgcatacacagggagactcctgaagttt 359
Query: 61 catttctttgcttgtttctttctccagataatctggaaaaaaaagaaaaaag-aaaaaaa 119
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 358 catttctttgcttgtttctctctccagataatctggaaaaaaaagaaaaaagaaaaaaaa 299
Query: 120 ataagacacatgcatggattgttgcaggatggagtaacacacgtattctttatggaaaga 179
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 298 ataagacacatgcatggattgttacaggatggagtaacacacgtattctttatggaaaga 239
Query: 180 tgtggggagagaggaaaaaggagagagagggagactgg 217
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tgtggggagagaggaaaaaggagagagagggagactgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 219
Length of database: 620
Length adjustment: 9
Effective length of query: 210
Effective length of database: 611
Effective search space: 128310
Effective search space used: 128310
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
