Query= MSMg01no372_d21.b1 MSMg01no372_d21.b1 CHROMAT_FILE:
MSMg01no372_d21.b1 PHD_FILE: MSMg01no372_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:56 2005
(479 letters)
>mm_chr8_23895082_23895960
Length = 879
Score = 741 bits (383), Expect = 0.0
Identities = 419/431 (97%)
Strand = Plus / Plus
Query: 2 accagtcaaggggaagtcaatgctacctcattattcctggttggtaatacaagaggatag 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 accagtcaaggggaagtcaatgctacctcattattcctggttggtaatacaagaggatag 261
Query: 62 cagacccaaagagcaactatgatcccagataactgcatggtgggttttggttgtcagaga 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cagacccaaagagcaactatgatcccagataactgcatggtgggttttggttgtcagaga 321
Query: 122 ccagaggagaacagagcccaggtctgtgcatggcaaggtgtaatagactttaattccgtg 181
||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 322 ccagaggagcacagagcccaggtctgtgcatggcaaggtctaatagacttcaattccgta 381
Query: 182 tacaaaagctgagcacacaatccttagtgtttcagatcccttgggcttctcatcaagtcc 241
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 382 tacaaaagctgagcacacaatctttagtgtttcagatcccttgggcttctcatcaagtcc 441
Query: 242 ctttttaaagccattaacactcataaccagttttaatggcacctagtcaccacctactgg 301
||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||
Sbjct: 442 ctttttaaagccattaacaatcacaaccagttttgatggcacctagtcaccacctactgg 501
Query: 302 cgtagaagaaaatataagttgatgacgtttcctgctcccaggccccatccctctaaaaca 361
| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 502 catagaagaaaatataagttgatgacgtttcctgctcccaggcccaatccctctaaaaca 561
Query: 362 agaccaagggaagggatacagcagccagccctgatctgtacagaacccattccaagatcc 421
||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 562 agaccgagggaagggatacagcagtcagccctgatctgtacagaacccattccaagatcc 621
Query: 422 cagtgggagtt 432
|||||||||||
Sbjct: 622 cagtgggagtt 632
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space: 407561
Effective search space used: 407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_d21.g1 MSMg01no372_d21.g1 CHROMAT_FILE:
MSMg01no372_d21.g1 PHD_FILE: MSMg01no372_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:56 2005
(413 letters)
>mm_chr8_24072100_24072911
Length = 812
Score = 717 bits (371), Expect = 0.0
Identities = 398/407 (97%), Gaps = 3/407 (0%)
Strand = Plus / Minus
Query: 1 ctacccgcccctttgcagctgggcctcctctgtcactcctccaaatttgtcctctatcct 60
|||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 605 ctacccgcccctttacagctgggcctccactgtcactcttccaaatttgtcctctatcct 546
Query: 61 ttctagttcctcctgtggtaactgttgctgagtgtactcttgcagtgacacctaacgcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ttctagttcctcctgtggtaactgttgctgagtgtactcttgcagtgacacctaacgcat 486
Query: 121 tcttctgtccaaaagctggtctgctaggctcactccaagccaggctgacagacatctggg 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tcttctgtccaaaagctgatctgctaggctcactccaagccaggctgacagacatctggg 426
Query: 181 aggggcacaaggccaaaaggccctgggggatttctctgctcttattggcatttgatcccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 aggggcacaaggccaaaaggccctgggggatttctctgctcttattggcatttgatcccc 366
Query: 241 tttgcctagatccactattttatctggtagaaaatataataattcagcttaaaataggcc 300
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 365 tttgcctagatccactattttatctggtagaaaa-at-ataattcagcttaaaataggcc 308
Query: 301 ttctatttccgtttttcgtggcccacacatcttattacttgtgtacatacagatgtatgt 360
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 307 ttctatttccgtttttcatggcccacaaatcttattacttgtgtacatacagatgtatgt 248
Query: 361 ggtatg-tttggggggcattacatgtatttgtgagcatgtgtaggta 406
|||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ggtatgttttggggggcattacatgtatttgtgagcatgtgtaggta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 812
Length adjustment: 9
Effective length of query: 404
Effective length of database: 803
Effective search space: 324412
Effective search space used: 324412
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
