XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTGGGC
ATACGGACAGTGTATGTAGGAAGGAGTGGAGTGAAGGTAGCAAGCTGGCA
GTCACTTTAACAGTGAGTTGTTCCTGGGCAGACTGGACACCACTCTCCCA
ACCCTGCTGGGGACTTCTTTTCTCTACCTTGTTTCTGACAGCACATTCAG
TGCGGAGGAAGGATTGGCCACTTCCTCCTCTGTTGCAAGTTCCCAGGTAC
CGGGTTCTCTCCTTTTGTGCGTTCATCTGTAGCAGTGACATTGAAACTTA
TTAATATTTCTAGGATGGATCCGTGGGCTGGAGGTAGACCAATCTAAGGG
TCACAACAACTCAGCCAGGACAACTGCAGGACTGGAACTAGATACAATCC
GGAGCTTTATATGTGGTCTCCTAAAAATACTCAAGGGAAGTAAATTTATA
ACCTATAGCCATGTTCCCTAAAATTCCCAAAGAGATTTAAATGCTGTACA
ACCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCACT
ATGTCTGCCCCAACAAAAATGAAGGATATTTTCCTTCTCCTTCAGTATGC
GGTGAACTCAATAACACTCATCCTGTTTTTCCTCCAAAGATTTAACTTTA
CTTGCCAGTGCACCCACATGTACATGTGTGTCTCCACCGTCCAGCTTAAG
GACTTCAAACCACTGGATCTTCATTGGTTATATGGCCCGGCTATGGTTTT
TAN

TTGAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXATCTTCATAGCAATTAGGGAAATGCAAATAAA
TACAACTCTGGGATTTCATCTTATGGCAGCCAGAATGGCAAAGACCAGCA
AAGCAACCAACAACAAATGCTGAAGTAGGTGGGGGAGAAAGGGTATTCTT
ATGTGCCGTTGGTGGGACTGCAAACTGGCACAGTCACTGTGGAAATCAGT
GTTTGAATTCCCAAAACGCTAAAAGTAAATCTACCATAGGACCCAGATAT
GTCACTCTTCGGCATGCATACACCCAAAAGACTCAGCATCCTATTCCAGG
ATATGTACTCTGTCATGTTTATGGCTGCTCTATTCACAACAGCTAGGAAA
TGGATACAATCTAAATGTCCTTAAGCCAAGCAATGGATATGAAAATGTGG
TGTGTGTCTGCCACACGCACGTGGGTACTACTCAGCTGTAAGGGGGTGGG
GGAGGAAATCATGGGATCTGCAGGTTAATGATCATACCGATCGAGGTATA
CCAGACCTCGAAGAGCCACACTGTATGCTCTCTTTGGCCCCTGGATGCTC
CCAATTTAAAATTTCCCTAACCAAAATATTTTGCCTGTGGTGGTCCCCCC
CTATCTTATTATACGCATGAGGTGCCTATTTCTTCTCTCTCCCCCTACTC
CTTATTACCACGCACCAATCCCCTCTCTTGCTGTTTTCTTCTTCTTTCCC
CTTTTATTTTCTTCTGTTTCCCCTGATTCTCTCTCCTCTCTTN

Query= MSMg01no372_e20.b1 MSMg01no372_e20.b1 CHROMAT_FILE:
MSMg01no372_e20.b1 PHD_FILE: MSMg01no372_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:01 2005
         (517 letters)



>mm_chr8_119392814_119393730
          Length = 917

 Score = 1000 bits (517), Expect = 0.0
 Identities = 517/517 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtgtatgtaggaaggagtggagtgaaggtagcaagctggcagtcactttaacagtgagtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 gtgtatgtaggaaggagtggagtgaaggtagcaagctggcagtcactttaacagtgagtt 583

                                                                       
Query: 61  gttcctgggcagactggacaccactctcccaaccctgctggggacttcttttctctacct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gttcctgggcagactggacaccactctcccaaccctgctggggacttcttttctctacct 523

                                                                       
Query: 121 tgtttctgacagcacattcagtgcggaggaaggattggccacttcctcctctgttgcaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tgtttctgacagcacattcagtgcggaggaaggattggccacttcctcctctgttgcaag 463

                                                                       
Query: 181 ttcccaggtaccgggttctctccttttgtgcgttcatctgtagcagtgacattgaaactt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ttcccaggtaccgggttctctccttttgtgcgttcatctgtagcagtgacattgaaactt 403

                                                                       
Query: 241 attaatatttctaggatggatccgtgggctggaggtagaccaatctaagggtcacaacaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 attaatatttctaggatggatccgtgggctggaggtagaccaatctaagggtcacaacaa 343

                                                                       
Query: 301 ctcagccaggacaactgcaggactggaactagatacaatccggagctttatatgtggtct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ctcagccaggacaactgcaggactggaactagatacaatccggagctttatatgtggtct 283

                                                                       
Query: 361 cctaaaaatactcaagggaagtaaatttataacctatagccatgttccctaaaattccca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 cctaaaaatactcaagggaagtaaatttataacctatagccatgttccctaaaattccca 223

                                                                       
Query: 421 aagagatttaaatgctgtacaaccatccatccatccatccatccatccatccatccatcc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 aagagatttaaatgctgtacaaccatccatccatccatccatccatccatccatccatcc 163

                                                
Query: 481 atccatccactatgtctgccccaacaaaaatgaagga 517
           |||||||||||||||||||||||||||||||||||||
Sbjct: 162 atccatccactatgtctgccccaacaaaaatgaagga 126


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space:   459849
Effective search space used:   459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)