Query= MSMg01no372_h17.b1 MSMg01no372_h17.b1 CHROMAT_FILE:
MSMg01no372_h17.b1 PHD_FILE: MSMg01no372_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:14 2005
(504 letters)
>mm_chr8_68412847_68413750
Length = 904
Score = 547 bits (283), Expect = e-160
Identities = 310/323 (95%), Gaps = 8/323 (2%)
Strand = Plus / Minus
Query: 5 gaattccatacattacatttggattatgttcaccttcagttcttaaatcttactccttct 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaattccatacattagatttggattatgttcaccttcagttcttaaatcttactccttct 261
Query: 65 gtatttactcccactaccaaccccttacttacagcagcaaatggcctttttaaattaaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gtatttactcccactaccaaccccttacttacagcagcaaatggcctttttaaattaaaa 201
Query: 125 acaaaaaagtaccaagtttgatttgtgctgtcaatatatccactggttcaaggccaacaa 184
||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 200 acaaaaaagtaccaaatttgatttgtgctgtccatatatcctttggttcaaggccaacaa 141
Query: 185 ttagtatgtgatcaacttactagggaccaaacacttatagaaaacttactgttgcttccg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 ttagtatgtgatcaacttactagggaccaaacacttatagaaaacttactgttgcttccg 81
Query: 245 cagaagacatcaattctttttttttttttttggattcttttttttt-----aggtatttt 299
||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 80 cagaagacatcaatt---tttttttttttttggattcttttttttttaattaggtatttt 24
Query: 300 cttcatttacattttcaatgcta 322
|||||||||||||||||||||||
Sbjct: 23 cttcatttacattttcaatgcta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_h17.g1 MSMg01no372_h17.g1 CHROMAT_FILE:
MSMg01no372_h17.g1 PHD_FILE: MSMg01no372_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:14 2005
(401 letters)
>mm_chr8_68344024_68344823
Length = 800
Score = 596 bits (308), Expect = e-174
Identities = 377/408 (92%), Gaps = 17/408 (4%)
Strand = Plus / Plus
Query: 3 tacattagaggtttatcatctaggttagagtgtagttcagaaggcagagttcttgattag 62
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 197 tacatgagaggtttatcatctaggttagagtgtagttcagaaggcggagttcttgattag 256
Query: 63 catgcaatgagccaatgttctatccacagaacttcttaaatatggcagtatcttgtctct 122
||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||
Sbjct: 257 catgcaatgagccaatgttctatccccagaactgcttaaacatggcagtatcttgtctct 316
Query: 123 caatcccatcttttgggagat---ggaggcaaaacaatagaagttcaaggtcaaagtcaa 179
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 317 caatcccatctttt-ggagatgtgggaggcaaaacaatagaagttcaaggtcaaagtcaa 375
Query: 180 ggtcatgtttagaattcaaggtcagcctgagatatgaaacattgtctcaaga------ta 233
||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 376 ggtcatgcttagaattcaaggtcagcctgagatatgaaacattgtctcaagacacttttt 435
Query: 234 tgtcttttcttttcttttcttttttttcttttttccttgtcatgagtgaccagttaatgc 293
| | |||| |||| |||| |||||||| |||||| ||||||||||||||||||||||||
Sbjct: 436 tttttttttttttttttttttttttttttttttt--ttgtcatgagtgaccagttaatgc 493
Query: 294 ttaaggtagcttgtctttggaaattattgaaatatattggatgaagggacactttttact 353
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ttaaggtaacttgtctttggaaattattgaaatatattggatgaagggacactttttact 553
Query: 354 caagtactcaagtttttgtttttctctctccccccccccccccagctt 401
|||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 554 caagtactcaagtttttgtttttctctc-----ccccccccccagctt 596
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 800
Length adjustment: 9
Effective length of query: 392
Effective length of database: 791
Effective search space: 310072
Effective search space used: 310072
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
