Query= MSMg01no373_g01.b1 MSMg01no373_g01.b1 CHROMAT_FILE:
MSMg01no373_g01.b1 PHD_FILE: MSMg01no373_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:19 2005
(569 letters)
>mm_chr8_45708062_45709031
Length = 970
Score = 1040 bits (538), Expect = 0.0
Identities = 553/558 (99%), Gaps = 1/558 (0%)
Strand = Plus / Minus
Query: 13 gaattcaacaagaataccttcatcgtaagggaatgttttgcaataaaataagattaggta 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 gaattcaacaagaataccttcatcgtaagggaatgttttgcaataaaataagattaggta 711
Query: 73 gatacatcagttccgaaaatactgcaattcctggaacaccgacaaaattagttgaaaatt 132
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 710 gatagatcagttccgaaaatactgcaattcctggaacaccgataaaattagttgaaaatt 651
Query: 133 gaaaagaagaaatcttgaaagtctaag-aaaaaaaaagaaatcaaagatatgaaagttta 191
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 650 gaaaagaagaaatcttgaaagtctaagaaaaaaaaaagaaatcaaagatatgaaagttta 591
Query: 192 ctttatatctccatggatagcatgcgataatatttaagtttctgaaaattacatcaggat 251
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ctttatatctccatggataacgtgcgataatatttaagtttctgaaaattacatcaggat 531
Query: 252 gttcagtttcatttcctagtcaatggacggccttgttccctggtgttctattaaatcagc 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gttcagtttcatttcctagtcaatggacggccttgttccctggtgttctattaaatcagc 471
Query: 312 tttggatcttcatggccctccaaggaacttctaactctttacccttcctaagagccatct 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tttggatcttcatggccctccaaggaacttctaactctttacccttcctaagagccatct 411
Query: 372 gttgcatggaagttccccctgggcctaacataaatatttacatgtgagttcatttagggg 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gttgcatggaagttccccctgggcctaacataaatatttacatgtgagttcatttagggg 351
Query: 432 agggagtgtgcctaataaatcgccgaattctgtcctgcccaatgtgtagttacagtttat 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 agggagtgtgcctaataaatcgccgaattctgtcctgcccaatgtgtagttacagtttat 291
Query: 492 ttttctcaaggtaccaccagcctgaagctaacacagtgattctttttctaattagttcaa 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ttttctcaaggtaccaccagcctgaagctaacacagtgattctttttctaattagttcaa 231
Query: 552 ccatctaaacaggtgata 569
||||||||||||||||||
Sbjct: 230 ccatctaaacaggtgata 213
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 970
Length adjustment: 10
Effective length of query: 559
Effective length of database: 960
Effective search space: 536640
Effective search space used: 536640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_g01.g1 MSMg01no373_g01.g1 CHROMAT_FILE:
MSMg01no373_g01.g1 PHD_FILE: MSMg01no373_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:19 2005
(414 letters)
>mm_chr8_45573551_45574364
Length = 814
Score = 733 bits (379), Expect = 0.0
Identities = 408/419 (97%), Gaps = 5/419 (1%)
Strand = Plus / Plus
Query: 1 ataggaagaataatttataaatcttaggaaatctaaagatgttaagacatgatattggaa 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagaaagaataatttataaatcttaggaaatctaaagatgttaagacatgatattggaa 260
Query: 61 aacgtaaaacaaacaaaatagtgttggagctataaaatatagaaaaatatctaagaagta 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacataaaacaaacaaaatagtgttggagctataaaatatagaaaaatatctaagaagta 320
Query: 121 aataaatacattaaatacatagatatttggaatgaaatgggaaaacagtattataaatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aataaatacattaaatacatagatatttggaatgaaatgggaaaacagtattataaatag 380
Query: 181 acatactatcaagtggtgatttttt--aaaatttatttcttttatatatgtaagtacact 238
||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||
Sbjct: 381 acatactatcaagtggtgattttttttaaattttatttattttatatatgtaagtacact 440
Query: 239 gtaactgtcttcagacacaccaaaaaa-gagtactgggttccattacaggtggttgtgag 297
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 441 gtaactgtcttcagacacaccaaaaaaagagtactgggttccattacaggtggttgtgag 500
Query: 298 ccaccatgtggttgctgggaattgaactcaggacctctggaagagaagtcagtgcactta 357
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccaccatgtggttgctgggaatcgaactcaggacctctggaagagaagtcagtgcactta 560
Query: 358 accactgagccatctctccagcccaggtggtgatttttttttc--aaatttacttttgc 414
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 561 accactgagccatctctccagcccaggtggtgattttttttttttaaatttacttttgc 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
