Query= MSMg01no373_i03.b1 MSMg01no373_i03.b1 CHROMAT_FILE:
MSMg01no373_i03.b1 PHD_FILE: MSMg01no373_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:29 2005
(549 letters)
>mm_chr8_121526657_121527605
Length = 949
Score = 909 bits (470), Expect = 0.0
Identities = 526/546 (96%), Gaps = 3/546 (0%)
Strand = Plus / Plus
Query: 5 gaattcacggtgatttcagcttgaggattcgggtgcaggtgcctcctgctgtacctctct 64
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 205 gaattcacggtgataagagcttgaggattcggatgcaggtgcctcctgctgtacctctct 264
Query: 65 gtctatgcattcattcactcactctccccattcctacttcatcagagcttctgtagacac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtctatgcattcattcactcactctccccattcctacttcatcagagcttctgtagacac 324
Query: 125 agggacaactaaactctgtcatctgtagcccgtgaagcagagccctgtggtccaacttga 184
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 325 agggacaactaaactctgtcatctgtagcctgtgaagcagagccctgtggtccaacttga 384
Query: 185 atgggtttcagcccgggtcctgaaaatggcctagtgtgcagctgtgctaaactcctgtgc 244
|| ||||||||||| |||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 385 attggtttcagcccaggtcctgaaagtgacctagtgtgcagctgtgctaaactcctgtgc 444
Query: 245 tttctcaaaaacacccacgcccttgtgctacctctcccacagcagagatggcctgagatg 304
|||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttctcaaaaacccccacactcttgtgctacctctcccacagcagagatggcctgagatg 504
Query: 305 agatggccacacatggtctccctgatacccaacagacagacgacagcatccccctgtggc 364
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 505 agatggccacacatggtctccctgctacccaacagacagacgacagcatccccctgtggc 564
Query: 365 cacatttctactatgccttcaaccagtttatgcagatgtgttcagggacctaggttagtt 424
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 565 cacatttccactatgccttcaactagtttatgcagatgtgttcagggacctaggttagtt 624
Query: 425 gggaaattcatgaaagaactttaatctgagattatttctgtcaatgtaaaaataatgaga 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 625 gggaaattcatgaaagaactttaatctgagattatttctgtcaatgtaaaaataatcaga 684
Query: 485 atactcatctcaataggaacaaggggtggttgattctggaaccaaaaaa---catgctcg 541
||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 685 atactcatctcaataggaacaagaggtggttgattctggaaccaaaaaaaaacatgctcg 744
Query: 542 tggccc 547
||||||
Sbjct: 745 tggccc 750
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_i03.g1 MSMg01no373_i03.g1 CHROMAT_FILE:
MSMg01no373_i03.g1 PHD_FILE: MSMg01no373_i03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:29 2005
(236 letters)
>mm_chr8_121723785_121724420
Length = 636
Score = 456 bits (236), Expect = e-133
Identities = 236/236 (100%)
Strand = Plus / Minus
Query: 1 ctagtcttgttaaacatctttattgagttcctagtcttgttatatgtaactggtcacagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctagtcttgttaaacatctttattgagttcctagtcttgttatatgtaactggtcacagc 377
Query: 61 tcctctattaaatagttctttctctgaaacagaaaaaaaggtaccctacccttgatgaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tcctctattaaatagttctttctctgaaacagaaaaaaaggtaccctacccttgatgaga 317
Query: 121 tggaacactacataaagaaggtgtgggaaacacatatcctcaaccaccatacatatctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tggaacactacataaagaaggtgtgggaaacacatatcctcaaccaccatacatatctgt 257
Query: 181 gaacctgctgtgaacatgctgctcatgtgtgcagaagttcatatcagaaaacactt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gaacctgctgtgaacatgctgctcatgtgtgcagaagttcatatcagaaaacactt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
