Query= MSMg01no373_k14.b1 MSMg01no373_k14.b1 CHROMAT_FILE:
MSMg01no373_k14.b1 PHD_FILE: MSMg01no373_k14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:40 2005
(111 letters)
>mm_chr8_3151532_3152042
Length = 511
Score = 207 bits (107), Expect = 2e-58
Identities = 110/111 (99%)
Strand = Plus / Plus
Query: 1 catccatctatcataaaatagaaccattactagaacaaccatcattcatttaccaagatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catccatctatcataaaatagaaccattactagaacaaccatcattcatttaccaagatc 260
Query: 61 accagtatgaaccaaactctcacagtgatactgcccaccagccagtgttat 111
|||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 accagtatgaaccagactctcacagtgatactgcccaccagccagtgttat 311
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 111
Length of database: 511
Length adjustment: 8
Effective length of query: 103
Effective length of database: 503
Effective search space: 51809
Effective search space used: 51809
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no373_k14.g1 MSMg01no373_k14.g1 CHROMAT_FILE:
MSMg01no373_k14.g1 PHD_FILE: MSMg01no373_k14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:40 2005
(496 letters)
>mm_chr8_3366926_3367821
Length = 896
Score = 743 bits (384), Expect = 0.0
Identities = 412/428 (96%), Gaps = 12/428 (2%)
Strand = Plus / Minus
Query: 1 aattctctcccaaagctgttgttgctgggagctgctccagcctaaggcagtcttggctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aattctctcccaaagctgttgttgctgggagctgctccagcctaaggcagtcttggctct 363
Query: 61 gagccacagcccctgtgccaattcagcctgttgtggcaatagctcctggctgccttcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gagccacagcccctgtgccaattcagcctgttgtggcaatagctcctggctgccttcctt 303
Query: 121 gctcttgctccccccacccccctccagaaagccacaactctttggctgctctggccccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gctcttgctccccccacccccctccagaaagccacaactctttggctgctctggccccac 243
Query: 181 aggtatatccctacggatagcacctggaatgcagaccatcggcggaggacaacctgggat 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aggtagatccctacggatagcacctggaatgcagaccatcggcggaggacaacctgggat 183
Query: 241 tcagggcct------ctttttttttactttggttattttggggcaaggtatctcactggc 294
||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tcagggcctcacgagc------tttactttggttattttggggcaaggtatctcactggc 129
Query: 295 cacagctcagcaagtagcctagtttagccaaggagactcaaagtccacttatctctacct 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 cacagctcagcaagtagcctagtttagccaaggagactcaaagtccacttatctctacct 69
Query: 355 ccctaaagttccaatgttaggattgtctcaccccacctgctctgtgccatggcatacgac 414
||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||
Sbjct: 68 ccctaaagttccaatgttaggatagtctcaccccacctgctctgtgccatggtatatgac 9
Query: 415 ccatgtgt 422
||||||||
Sbjct: 8 ccatgtgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space: 430596
Effective search space used: 430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
