Query= MSMg01no374_i23.b1 MSMg01no374_i23.b1 CHROMAT_FILE:
MSMg01no374_i23.b1 PHD_FILE: MSMg01no374_i23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:50 2005
(255 letters)
>mm_chr8_120964363_120965021
Length = 659
Score = 476 bits (246), Expect = e-139
Identities = 252/256 (98%), Gaps = 4/256 (1%)
Strand = Plus / Plus
Query: 4 ggaattcaagtcacatgaaccaaagtgaattaaatatacattcttgggctagggatgtag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaagtcacatgaaccaaagtgaattaaatatacattcttgggctagggatgtag 263
Query: 64 ttcagaggtggacaacttacctaccgagcatatgcgaggtcccgggccccgtccccagct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttcagaggtggacaacttacctaccgagcatatgcgaggtcccgggccccgtccccagct 323
Query: 124 ctgtcaatattaaaataatgtaaataataaa----ggcacaaccttgttctcagaagctt 179
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 324 ctgtcaatattaaaataatgtaaataataaataaaggcacaaccttgttctcagaagctt 383
Query: 180 tttatctgtttctcatgttcctcatatcacattccgagaaagagagatgcatcccccagg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tttatctgtttctcatgttcctcatatcacattccgagaaagagagatgcatcccccagg 443
Query: 240 tcagatgaccatgagg 255
||||||||||||||||
Sbjct: 444 tcagatgaccatgagg 459
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 255
Length of database: 659
Length adjustment: 9
Effective length of query: 246
Effective length of database: 650
Effective search space: 159900
Effective search space used: 159900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no374_i23.g1 MSMg01no374_i23.g1 CHROMAT_FILE:
MSMg01no374_i23.g1 PHD_FILE: MSMg01no374_i23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:50 2005
(161 letters)
>mm_chr1_27410501_27411061
Length = 561
Score = 311 bits (161), Expect = 1e-89
Identities = 161/161 (100%)
Strand = Plus / Minus
Query: 1 agataagggaaaatgattgttgaactcaatagacattacttttccctctgaagaggagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agataagggaaaatgattgttgaactcaatagacattacttttccctctgaagaggagaa 302
Query: 61 aagtagtctcataccagccacactgtaaaatgtaaagctacatatttgatagatgtttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagtagtctcataccagccacactgtaaaatgtaaagctacatatttgatagatgtttga 242
Query: 121 gaaaaacggcatctcaaaaactactaacatgttccactttg 161
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaaaacggcatctcaaaaactactaacatgttccactttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 161
Length of database: 561
Length adjustment: 8
Effective length of query: 153
Effective length of database: 553
Effective search space: 84609
Effective search space used: 84609
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
