Query= MSMg01no377_h18.b1 MSMg01no377_h18.b1 CHROMAT_FILE:
MSMg01no377_h18.b1 PHD_FILE: MSMg01no377_h18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:40 2005
(471 letters)
>mm_chr8_48036767_48037637
Length = 871
Score = 833 bits (431), Expect = 0.0
Identities = 461/471 (97%)
Strand = Plus / Minus
Query: 1 ctcagctacaggagtggaaaggaacttcaaaaccatcttctcagagctatgtttcataag 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 671 ctcagctacaggagtggaaaggaacttcaaaaccatcttttcagagctatgtttcataag 612
Query: 61 acatctgcacatggctctcaaagtatttctttacatctttcttcccttacgctggaaggg 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 acacctgcacatggctctcaaagtatttctttacatctttcttcccttacgctggaaggg 552
Query: 121 cgtagcacagctggaactcacagccaaaacagaaatcagaaatggaagtgctccaccaca 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 551 cgtagcacagctggaactcacagccaaaacagaaatcagaaatggaagcgctccaccaca 492
Query: 181 cacattggccttagctgacccacaggacagtgccgcctacatcttacaatgaaattgcgt 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 491 cacattggccttagctgacccacaggacagtgccacctacatcttacaatgaaattgcgt 432
Query: 241 agttcagtaggtatttacaaagatattttttctgtcttgtcatcggaaagcttaacagaa 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 431 agttcagtaggtatttacaaagatattttttctgtcttgtcatcagaaagcttaacagaa 372
Query: 301 aggggctttctgtaatgtagaaatgttttcatagttttaaggacttatgaccactgtgtc 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 371 aggggctttctgtaatgtagaaatgttttcatagttttaagggcttatgaccactgtgtc 312
Query: 361 acgagtacttattatagcaaacaacttcgtctcacattcacttgtcactttcatagaacg 420
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 311 acgagtatttattatagcaaacaacttcgtctcacattcacttgtcgctttcatagaacg 252
Query: 421 tggcttgtcgttcaaaacctacacatgatgtgcaatacccacttgggtcag 471
|||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 251 tggcttgtcgttcaaaacctacacataatgtgcaatacccacttaggtcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_h18.g1 MSMg01no377_h18.g1 CHROMAT_FILE:
MSMg01no377_h18.g1 PHD_FILE: MSMg01no377_h18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:41 2005
(436 letters)
>mm_chr8_47881318_47882158
Length = 841
Score = 667 bits (345), Expect = 0.0
Identities = 403/441 (91%), Gaps = 30/441 (6%)
Strand = Plus / Plus
Query: 1 tgagcaaatatctgtttcctcttctttactct-----ctctcttcatcttttaatctaaa 55
||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 201 tgagcaaatctctgtttcctcttctttactctactctctctcttcattttttaatctaaa 260
Query: 56 ggacacggtgaataatttaatgggtcaggctttatttttgcaccaggtgtaagagcttaa 115
|||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 261 ggacacggtgaataatttaatggggcaggctttatttttgcaccaggtgcaagagcttaa 320
Query: 116 aaccagaaagcagattgtggccagcttttagtgatcgaaaaagatattgtcaagaaaaca 175
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 aaccagaaagcagattgtggccagcttttagtgagggaaaaagatattgtcaagaaaaca 380
Query: 176 aaacaaaacaaaacaaaacaaaacaaaacaaaaccaaccaaaacttctagtttcatttta 235
||||||||| |||||||||||||| |||||||||||
Sbjct: 381 aaacaaaac-------------------------caaccaaaacttctggtttcatttta 415
Query: 236 tcttctcaggttcctcttaaacctttttctttcccttacctatttattttgaatttaaga 295
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 416 tcttctcaggttcctcttaaacttttttctttcccttacctatttattttgaatttaaga 475
Query: 296 agactgtaattgaatatctctgcttgagtcctttcttccagaaaggatgggacaccgaaa 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 agactgtaattgaatatctctgcttgagtcctttcttccagaaaggatgggacaccgaaa 535
Query: 356 aatagaaataaataaactacatacttgctttacatgtcctgtcatgtactggaaggtttt 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 aatagaaataaataaactacatacttgctttacatgtcctgtcatgtactggaaggtttt 595
Query: 416 gtggcaagcttggaagctgag 436
|||||||||||||||||||||
Sbjct: 596 gtggcaagcttggaagctgag 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 841
Length adjustment: 9
Effective length of query: 427
Effective length of database: 832
Effective search space: 355264
Effective search space used: 355264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
