Query= MSMg01no379_a17.b1 MSMg01no379_a17.b1 CHROMAT_FILE:
MSMg01no379_a17.b1 PHD_FILE: MSMg01no379_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:41 2005
(591 letters)
>mm_chr8_65601479_65602469
Length = 991
Score = 1091 bits (564), Expect = 0.0
Identities = 582/588 (98%)
Strand = Plus / Plus
Query: 4 ggaattcttgagttgcttgtagtttaaataagacatggaaacttctatatagtgtgaagc 63
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttgagctgattgtagtttaaataagacatggaaacttctatatagtgtgaagc 263
Query: 64 aattggccttaggttggagtagtctcttagctatcccatctaaacttatctgggattttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aattggccttaggttggagtagtctcttagctatcccatctaaacttatctgggattttt 323
Query: 124 catccactctctgtgtgcatcagttttctacatcttctccttttcttttcctggaagtcc 183
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 catccactctctgtgtggatcagttttctacatcttctccttttcttttcctggaagtcc 383
Query: 184 taccactctacatcctgccccaggtccattgtcagctattaattatataaaaaccttgtc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taccactctacatcctgccccaggtccattgtcagctattaattatataaaaaccttgtc 443
Query: 244 tagtctgacccaataagcagtaagacaatgtcccattcatctcttagaattgaatttagg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tagtctgacccaataagcagtaagacaatgtcccattcatctcttagaattgaatttagg 503
Query: 304 ccaggaaggctacctgaccttcatctaatggtctgtgaggaaggacaaacatttacatat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ccaggaaggctacctgaccttcatctaatggtctgtgaggaaggacaaacatttacatat 563
Query: 364 agaaaagtggagacgggccatagaaacaacaataccaaaatcctgccagcacttagctct 423
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agaaaagtagagacgggccatagaaacaacaataccaaaatcctgccagcacttagctct 623
Query: 424 ctgttggtacagatttaacaattgaaaatacaggaacacaggagcctgctatgactgggg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctgttggtacagatttaacaattgaaaatacaggaacacaggagcctgctatgactgggg 683
Query: 484 ttctatcagcacctaaccaatacagatgtagatacagccaaccattggactgagcctggg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttctatcagcacctaaccaatacagatgtagatacagccaaccattggactgagcctggg 743
Query: 544 gaccccattgaaagagctaagtgaagggctgaaggagctgaatggaat 591
||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 744 gaccccaatgaaagagctaagtgaagggctgaaggaactgaatggaat 791
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space: 569961
Effective search space used: 569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_a17.g1 MSMg01no379_a17.g1 CHROMAT_FILE:
MSMg01no379_a17.g1 PHD_FILE: MSMg01no379_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:41 2005
(547 letters)
>mm_chr8_65803742_65804687
Length = 946
Score = 625 bits (323), Expect = 0.0
Identities = 338/343 (98%), Gaps = 1/343 (0%)
Strand = Plus / Minus
Query: 205 aaaagggtatgtgcctaatgggctcggcttggcttgctgccatcttgaatggtgatctca 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 aaaagggtatgtgcctaatgggctcggcttggcttgctgccatcttgaatggtgatctca 887
Query: 265 ttagaatagaagcatttcatgggactttagtgccattttggttaagatgatcatgtagtg 324
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 ttaggatagaagcatttcatgggactttagtgccattttggttaagatgatcatgtagtg 827
Query: 325 tccctctagtgatgattgtattgcttattttacagtaaggaaaaacgaccaggcttctaa 384
|||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 826 tccctctagtgatgattgcattgcttattttacaggaaggaaaaaagaccaggcttctaa 767
Query: 385 caattggatcatacaaaaacaaacaaaaatattttgctaactttaataaggtttagcaat 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 caattggatcatacaaaaacaaacaaaaatattttgctaactttaataaggtttagcaat 707
Query: 445 ttggtaaaagttcattataaaaaactttttctatccttgttaagatttagctatttggtg 504
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 706 ttggtaaaagttcattataaaaa-ctttttctatccttgttaagatttagctatttggtg 648
Query: 505 aaacttagtcatataaaaactgtaatatttttactatcttggt 547
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 aaacttagtcatataaaaactgtaatatttttactatcttggt 605
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 946
Length adjustment: 10
Effective length of query: 537
Effective length of database: 936
Effective search space: 502632
Effective search space used: 502632
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
