CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGCAGGTATATGACTGTACTTGAGTAGTTTGCTTTGATTCTGAATT
CATCCACGTTCTTAATTTAAATGGCTTGTCTATTATGACAAACTTACATC
TTACTCATTTGTCTGGGCCTCTCTCTTTTTTTTTTCTGTTGAATACTGTG
AATATTTCAAACCTATCTAACATGTTTCACGCTGGCCATTTGATTCATCA
CATGGGCATCTCATCTTCAAATCCTCTCTATTTCTGACCATTCCATAGTT
GCTGCAGTCGGTTCCCAACTGGCTTTAAACCCAGAACATCATTGTGCTTT
GCTTTCTTCCTTGTTTTTCCTTCCAGTTGTCAGCATTCCCTCCTGTTTCT
TCCTTCTAATTCCTTTCTAAAAATAGAGGCATGTTTACTTTTCTTGTACA
CACACACTCACTGTGTGTACACACTGTGTGTGTGTGTGATATGTGTGTGT
GCATGTGCATATGCATATGTATATGTATAGCATGAGTTGCTTTATTCACC
TCCTTTCCAGTTGAGGATTATAAATTTGTGACATGTAAATAGGAAGCAGG
CTGTGACAGCAGAGGAGGGAGTCTATAGGGATAGTAGGTGACTTCAACAT
CAATATCCACCTCATAGACAATGTTATCATGTATCTATGGAAACTTTTAA
CTGACCGAAACCGACCCTTTTG

ATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGGAAACCTGATTGAACAAT
CTATCTGACCTCTAAATAAACTCTCTTTATACTTCATAGAGTGTGGTTAA
GAATCATGGCTTCAACATTGGAAACTAAACAGTCATCCCAGGCTAGACAC
ATCAAAAAATTGGAACTTGAAGCTGTCGCCCGTGAGAGTTGTAAGACTAA
GTACTGCACAGAGATTAGCCTAAAAGTTGTTAGTCTCTGACAGGCATGTC
TGATTGCATAAAGGTTGAGTGCCCTAGGGTCCTTTCCCCAGGAAAAACGG
CACGAGAGCAGGTCAGAGTTACTCTGTGTAAAAATCTGTGGTCCTGAGAG
TCAATCCTGTATATGGCCCCTAACATTACACACTGGGGATCAGACATCTA
CCTCTACCCACGGAGCTTGCTTCGTTCCTAACTCTCTTGCCTGTTCCAGG
TTACACTCAACAGACTGGGTATACTTCTTCTAGTCTCCTAACTGACTTTG
CCCTTGTCGACCCTCCTGTACTTTAACACTTCCTCCCCCGCATTTTCCCT
ACCTCTTTTGTTGACTTTCCCCCACCGCCTTTCCCTTTTCCCCCTATTTT
TCTATGCCCCCCCTTTTATTTTCTCTATCCGCCCGCCTTATTTCTCCTAT
CCTATTTTTCCCCTTCTTCCCTCTATTTTCTCGCTTTTTTTTTCCCCTTC
TCC

Query= MSMg01no379_o06.b1 MSMg01no379_o06.b1 CHROMAT_FILE:
MSMg01no379_o06.b1 PHD_FILE: MSMg01no379_o06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:46 2005
         (554 letters)



>mm_chr8_43842198_43843150
          Length = 953

 Score = 1050 bits (543), Expect = 0.0
 Identities = 549/551 (99%), Gaps = 1/551 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcagcaggtatatgactgtacttgagtagtttgctttgattctgaattcatccac 63
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagcagg-atatgactgtacttgagtagtttgctttgattctgaattcatccac 262

                                                                       
Query: 64  gttcttaatttaaatggcttgtctattatgacaaacttacatcttactcatttgtctggg 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gttcttaatttaaatggcttgtctattatgacaaacttacatcttactcatttgtctggg 322

                                                                       
Query: 124 cctctctcttttttttttctgttgaatactgtgaatatttcaaacctatctaacatgttt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cctctctcttttttttttctgttgaatactgtgaatatttcaaacctatctaacatgttt 382

                                                                       
Query: 184 cacgctggccatttgattcatcacatgggcatctcatcttcaaatcctctctatttctga 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cacgctggccatttgattcatcacatgggcatctcatcttcaaatcctctctatttctga 442

                                                                       
Query: 244 ccattccatagttgctgcagtcggttcccaactggctttaaacccagaacatcattgtgc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ccattccatagttgctgcagtcggttcccaactggctttaaacccagaacatcattgtgc 502

                                                                       
Query: 304 tttgctttcttccttgtttttccttccagttgtcagcattccctcctgtttcttccttct 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tttgctttcttccttgtttttccttccagttgtcagcattccctcctgtttcttccttct 562

                                                                       
Query: 364 aattcctttctaaaaatagaggcatgtttacttttcttgtacacacacactcactgtgtg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aattcctttctaaaaatagaggcatgtttacttttcttgtacacacacactcactgtgtg 622

                                                                       
Query: 424 tacacactgtgtgtgtgtgtgatatgtgtgtgtgcatgtgcatatgcatatgtatatgta 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tacacactgtgtgtgtgtgtgatatgtgtgtgtgcatgtgcatatgcatatgtatatgta 682

                                                                       
Query: 484 tagcatgagttgctttattcacctcctttccagttgaggattataaatttgtgacatgta 543
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 683 tagcatgagttgctttattcacctcctttccagttgaggattataaatttgtgacatgga 742

                      
Query: 544 aataggaagca 554
           |||||||||||
Sbjct: 743 aataggaagca 753


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 953
Length adjustment: 10
Effective length of query: 544
Effective length of database: 943
Effective search space:   512992
Effective search space used:   512992
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)