XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAT
AGAGTATCTCTAGGAGTGGCTTGGGACATGTTTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTTTCTCTCTCTTTCTCTCTCTTTCTCTCTCTCTCTCTT
TGTGTGTGTGTCTGTGTGTGTACACCTTAACTTTTGCTTTAAATATTCTG
CATTTAGAAATTTAAATATTTTAAAATTTATCATTTTATTTTTGCTCTCT
GCATCTTTACAGTGTGGGGGGGGCATGCATCACTGCATCATTGCATCATT
GCATCATTGCTTTTTATGCATCACAGCCTGCATACAGCAGCCAGAGGGCA
GAAATTGGTTCTCTCCCTCTACCATGTGGATTCCTGATATCAAACTCAGG
TAGGTGAGCTTGATGGCACATCCCCTCACCACCTGAGCTACCTTGTCAGC
TCTGTATTTTTAAATGCAAATAAAAATGTTGATCTGAAAGGAAAACAGTG
TCTGGTCAATGCTTTGGACAGTGCTGGACTGTAGTAAATACGGACAAATC
GTTACTTAAAAAACAAAACTAATTCTCCGAGTTGCCGTGACACTTGCCTG
CTGGAGAAGGCAAGGTGGCTGCTTGAGAAAGCACTCCCTGCTGATTGATT
TGTTCTCAGAGCCCACCACAGTGTTTTAGCCCGGCCTCCCTTAAGTGCAA
AAAGGAAAACAACTCTTTACTTCGGGATTATTTCCAACTGACTTTCTTCC
CTGCG

ATGTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXACCGTGGGCATCCCCCACCCCCACCCCTGAGAA
CTCCCCAACTGTAACTTTTAGGTTTTACTCTGTAGTAAGGCCAATAAGTG
TAGTAAGGCCAACAAAAGGCAACAGTGATGTCAGGGAAAGGTCAGTCAGG
AAATGTCAGCAGGGGCAAGCTGAGGAAGTTCTGTGTAAAGGTTTGAGCCT
CGTTCCAGAACACAACTCACTACAGGCTCCAACCTGAAGCTTCCTCTTTC
ATCCTAAATGTTATATTCTCTCTTTCTCTCACCATGATTTAGGGGGGTGG
AGAGTGAGTGTGCCTGTAATAATTCCATGGCCTAATCCCTCAGCTCCTTA
CAACTTGCATTCAACAACGGTCACCAGCCTTCAGTGTTGTCCCCCTTGCT
GATAGGATAGTTCATGTCCTTGTATAGCCCAAACTATCCTCAAACTCACC
ATGTATCTGAGGATAACCTTGAACTCTTGATCCTCCTGCCCTAAATGCTC
CTGAAGTCTCCTAAATGCTGATGCTGCCGTGTATGCATCATCATGCCCAT
TTTTTATTCAGTGCTTGGCTATCTAACCCCGGTTCTTTCTAGGCTAGTCT
TCTTTTCTGGTCTCTTTTTTTAATCCTTCCGGCCCCGGCGGGATTTTCTT
GATCACATATAATACATCTTGTTGTTTTTGTTATTACACGCATTCTCTTG
TTATTAGCACTCN

Query= MSMg01no380_k16.b1 MSMg01no380_k16.b1 CHROMAT_FILE:
MSMg01no380_k16.b1 PHD_FILE: MSMg01no380_k16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:48 2005
         (506 letters)



>mm_chr8_119652872_119653777
          Length = 906

 Score =  580 bits (300), Expect = e-170
 Identities = 312/316 (98%)
 Strand = Plus / Minus

                                                                       
Query: 191 ctttacagtgtggggggggcatgcatcactgcatcattgcatcattgcatcattgctttt 250
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  
Sbjct: 906 ctttacagtgtggggggggcatgcatcactgcatcattgcatcattgcatcattgcatca 847

                                                                       
Query: 251 tatgcatcacagcctgcatacagcagccagagggcagaaattggttctctccctctacca 310
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 tatgcatcacagcctgcatacagcagccagagggcagaaattggttctctccctctacca 787

                                                                       
Query: 311 tgtggattcctgatatcaaactcaggtaggtgagcttgatggcacatcccctcaccacct 370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 tgtggattcctgatatcaaactcaggtaggtgagcttgatggcacatcccctcaccacct 727

                                                                       
Query: 371 gagctaccttgtcagctctgtatttttaaatgcaaataaaaatgttgatctgaaaggaaa 430
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gagctaccttgtcagctctgtatttttaaatgcaaataaaaatgttgatctgaaaggaaa 667

                                                                       
Query: 431 acagtgtctggtcaatgctttggacagtgctggactgtagtaaatacggacaaatcgtta 490
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 acagtgtctggccaatgctttggacagtgctggactgtagtaaatacggacaaatcgtta 607

                           
Query: 491 cttaaaaaacaaaact 506
           ||||||||||||||||
Sbjct: 606 cttaaaaaacaaaact 591


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space:   444416
Effective search space used:   444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no380_k16.g1 MSMg01no380_k16.g1 CHROMAT_FILE:
MSMg01no380_k16.g1 PHD_FILE: MSMg01no380_k16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:48 2005
         (425 letters)



>mm_chr8_119468184_119469008
          Length = 825

 Score =  814 bits (421), Expect = 0.0
 Identities = 424/425 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   accgtgggcatcccccacccccacccctgagaactccccaactgtaacttttaggtttta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accgtgggcatcccccacccccacccctgagaactccccaactgtaacttttaggtttta 260

                                                                       
Query: 61  ctctgtagtaaggccaataagtgtagtaaggccaacaaaaggcaacagtgatgtcaggga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctgtagtaaggccaataagtgtagtaaggccaacaaaaggcaacagtgatgtcaggga 320

                                                                       
Query: 121 aaggtcagtcaggaaatgtcagcaggggcaagctgaggaagttctgtgtaaaggtttgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaggtcagtcaggaaatgtcagcaggggcaagctgaggaagttctgtgtaaaggtttgag 380

                                                                       
Query: 181 cctcgttccagaacacaactcactacaggctccaacctgaagcttcctctttcatcctaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctcgttccagaacacaactcactacaggctccaacctgaagcttcctctttcatcctaa 440

                                                                       
Query: 241 atgttatattctctctttctctcaccatgatttaggggggtggagagtgagtgtgcctgt 300
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgttaaattctctctttctctcaccatgatttaggggggtggagagtgagtgtgcctgt 500

                                                                       
Query: 301 aataattccatggcctaatccctcagctccttacaacttgcattcaacaacggtcaccag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aataattccatggcctaatccctcagctccttacaacttgcattcaacaacggtcaccag 560

                                                                       
Query: 361 ccttcagtgttgtcccccttgctgataggatagttcatgtccttgtatagcccaaactat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccttcagtgttgtcccccttgctgataggatagttcatgtccttgtatagcccaaactat 620

                
Query: 421 cctca 425
           |||||
Sbjct: 621 cctca 625


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space:   339456
Effective search space used:   339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)