CTGTCAACTATACGACTCACTATTCCGAGAGGATCCGCGGAATTCCTATT
TGCCGATGAATGTTCTGGAACTTAATAGTGACAATTGCCACAATACATTG
TGACTATACTTAATGCCATAAACTATGGTGTACTTGAGAGTCAAGGTATG
CTGGAGCATAACTTTAATCCCAATGTTCAGGAAGCAGATCTTTGTGAGTT
CAAGGCCAGCTCCAGGCCAGCTAGAGCTACATAGTGAGGCTTTTCCTCAA
ATAAGTAAATAGATAAACTAATGAAGAGAATCACATTAGGGTTGGAGAAA
TGGCTCACTCACTGGTTAAGAAAAAAACTTGCTGCTCTTCCAGGGGGCCC
AGTTCAAGTCTCCGAACCAACATATTGGCTTCCAACTGTAGTTCACTCCA
GGAGATTAGATGCTCTATTCTGGTTTCTGCAAGCACCAGACATGCAAGAG
GTGCACAGATATGTATGCAGAAAAATAATATACACATCTTTTTAAACTAA
TAAAAGTGATCCAGCAGCCAATAGTACTTGCTGCTCTTGCACATTACCCA
CGCTGTGTTCCCAGTATCCATATGTACTTCACACCCATCTTTATTTTCAG
CTCCCGTATTTCCCCATTATTGACCTCCTTTTGTAATCGTTCCATATTTT
TTCTCCCCCCCCCCCCCCCCTTATCAAACTTATTATTCCCCTCCTACTCT
CCTATTTTTTTTTTTGT

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAGATCTAGTGAAGAAAGGCTGTATTCCT
GAAACACAGACTGAGTAGCTACTAACCAGACCAGAGACTTTCCTGAACAG
GCTGCCTAATGGAATACACTTGGCAGGAACTCCCTCCATGGGAGTACCTA
CACATACATGCTATATGCCCACTACAGTGCATATAGCACATGACCAAACC
ACGGCCTGGATATTATTAAGCATTGCATGGTCACCCTGGCCTAGCAATGC
AGTATAACCAGTGATAACCACTACACTAAGACCTCATATATGAAATAAAT
AAATCTTAAAAAAAAAGAGTACATATTGCTCTTGTAGAACAAGACCCACT
TGGGTTACTAGGACCCACCTCAGGTGACCTACAAAACCCGAGGACCCAAC
ACCCTCATGGGGACTCCATGAGTACCCGAACCCATAGATTCACATATTTC
CACACACATACATATATTTCCATTTTAAATAAATCTTTATTTAAAAAAAA
AAACAACCAGCTGATGAGGGCAATGTGTACCTGTTACTTCAGTGCTGAGG
GAGCAGACCCAGTAGGATCCCTAGGCTATGCTAGCCATCCAATCCAGCTG
CCGTGGTAAGTTCCATGTTAAATAAGACAACCTGTCTCAAAAAATAAGGA
GAGAGTGAAATCTGGGCTCCGAAATGTGTATAC

Query= MSMg01no381_h01.g1 MSMg01no381_h01.g1 CHROMAT_FILE:
MSMg01no381_h01.g1 PHD_FILE: MSMg01no381_h01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:51 2005
         (520 letters)



>mm_chr8_90589536_90590455
          Length = 920

 Score =  874 bits (452), Expect = 0.0
 Identities = 499/520 (95%), Gaps = 10/520 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   agatctagtgaagaaaggctgtattcctgaaacacagactgagtagctactaaccagacc 60
           ||||| |||||||||||| ||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 201 agatccagtgaagaaagggtgtattcctgaaaaacaggctgagtagctactaaccagacc 260

                                                                       
Query: 61  agagactttcctgaacaggctgcctaatggaatacacttggcaggaactccctccatggg 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 agagactttcctgaacaggctgcctaatggaatacacttggcaggaactccctcgatggg 320

                                                                       
Query: 121 agtacctacacatacatgctatatgcccactacagtgcatatagcacatgaccaaaccac 180
           ||||||||||||||||||||||||||||||||||||       |||||||| ||||||| 
Sbjct: 321 agtacctacacatacatgctatatgcccactacagt-------gcacatgatcaaaccat 373

                                                                       
Query: 181 ggcctggatattattaagcattgcatggtcaccctggcctagcaatgcagtataaccagt 240
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 agcctggatattattaagcattgcatggtcaccctggcctagcaatgcagtataaccagt 433

                                                                       
Query: 241 gataaccactacactaagacctcatatatgaaataaataaatcttaaaaaaaaagagtac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gataaccactacactaagacctcatatatgaaataaataaatcttaaaaaaaaagagtac 493

                                                                       
Query: 301 atattgctcttgtagaacaagacccacttgggttactaggacccacctcaggtgacctac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 atattgctcttgtagaacaagacccacttgggttactaggacccacctcaggtgacctac 553

                                                                       
Query: 361 aaaacccgaggacccaacaccctcatggggactccatgagtacccgaacccatagattca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 aaaacccgaggacccaacaccctcatggggactccatgagtacccgaacccatagattca 613

                                                                       
Query: 421 catatttccacacacatacatatatttccattttaaataaatctttatttaaaaaaaaaa 480
           |||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||  
Sbjct: 614 catatttccacacatatacatatatttccatttaaaataaatctttattttaaaaaaa-- 671

                                                   
Query: 481 acaaccagctgatgagggcaatgtgtacctgttacttcag 520
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 672 -caaccagctgatgagggcaatgtgtacctgttacttcag 710


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space:   464100
Effective search space used:   464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)