XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACCTA
CACTTAGGCATCAAGCCTTCACAAGACTAAGGGCCTCTCCTCTTATTGAT
GTCCCACAAGGCCATCCTCTTCTAAAAATGCAGCTGAAGTTTGAGTTCTT
CCCTGTGTACTCTTTGGTTTGTAGTTTAATCCCTGGGAGTTCTGGGGTTA
CTGGTTGGTTCATATTGTTGTTCCTTCTATGGGGCTGCAAACCACTTCAG
CTTCTTGGGTCCTTTCTTTAGCTCCTCCGTTGGGGACCCTGTACTCCATC
CAATGGATGACTGTAACCATGTACTTCTGTATTTGTCAGGTACTGGTAGA
GCTTCTCAAAAGACAGCTATATAAGGCTCCTGTCAGCAAGCTGTTCTTGG
CATCCAAAATAGTATGTGGGTTTGGTAGCTGTATATGGGGTGGATCCCAA
GGTGGGACAGTCACTGGATAGCCTTCAGTTTCTGCTCCAAACATTGTGTT
TGTATTTCCTCCCATGGGTATTTTGATCCCCCTTCTAAGAAGGATCAAAG
TATTCACATTTTGGTGTCCCTTCTTGATGTTCATGTGGNCTGTGGATTGT
ATCTTGAGTATTCTGAGATTCTGGCTAATCCACTTATTATTGAGAGCGTA
CCATGTGCTTTATTTTGTAACTTGGGTACCTCCCTCCCGATGATACTTTC
TAGATCCGTCCTTTGGGCTAAAACCTTCTGAATTCCTTTTATTAATAACT
TAGAACCATTCCCTGGGGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCAACCAATTGATCATTGTTTTCTCACTCGGTCTT
TTACTGAATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTGAAAACT
GAACATGTATTTTTTCTCTTACAAATTTCATGGCAATTTTAATTATTATA
TTTTTTAATTATTACAATTATATTATTTATTTTTAATTATTGAGTTAATA
TGTGTTCTCCATTAAGTTTCAAAATTTTATTTATGCAAAAGAGAAATTAA
CTATAAGTGAAACTAACGATGATTTACAAGTGAATGAGAAGATCCACCGT
TACAACTTTTCTATAGATTGACTTAATACTTGAAGGAAAATAACCTTCAT
TAGCGGATACATATAGGTATTTAGCACATTCGATGTTTCAAACTTTGAGG
ATTGATTAAACATAAAAAAGCATAGTTAGGCCGGGCATGGTGGCGCATGC
CTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGA
GGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAGA
GAAACCTTGTCTCGAATAAACNAAACNAAACAAAACAAACCAACAAACCA
AAAAAAACCCAAAAAAAGCTTAATTTAACTAAGATTTACAATTAAAATAA
TTTGGATCTGAAACAATTTTTGACAAATGAACAGGGCCGGTGAAACATGT
TTTAAATGAAAAAA

Query= MSMg01no383_b07.g1 MSMg01no383_b07.g1 CHROMAT_FILE:
MSMg01no383_b07.g1 PHD_FILE: MSMg01no383_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:01 2005
         (518 letters)



>mm_chr8_53429332_53430249
          Length = 918

 Score =  926 bits (479), Expect = 0.0
 Identities = 514/533 (96%), Gaps = 15/533 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaccaattgatcattgttttctcactcggtcttttactgaatt---t-tgtgtgtgtgt 56
           ||||||||||||||||||||||||||||||||||| ||||||||   | |||||||||||
Sbjct: 789 caaccaattgatcattgttttctcactcggtctttaactgaattgtgtgtgtgtgtgtgt 730

                                                                       
Query: 57  gtgtgtgtgtgtgtgtg----------tactgaaaactgaacatgta-ttttttctctta 105
           |||||||||||||||||          |||||||||||||||||||| ||||||||||||
Sbjct: 729 gtgtgtgtgtgtgtgtgtatgtgtgtatactgaaaactgaacatgtatttttttctctta 670

                                                                       
Query: 106 caaatttcatggcaattttaattattatattttttaattattacaattatattatttatt 165
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 caaatttcatggcaattttaattattatattttttaattattacaattatattatttatt 610

                                                                       
Query: 166 tttaattattgagttaatatgtgttctccattaagtttcaaaattttatttatgcaaaag 225
           ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 609 tttaattattgagttaataggtgttctccattaagtttcaaatttttatttatgcaaaag 550

                                                                       
Query: 226 agaaattaactataagtgaaactaacgatgatttacaagtgaatgagaagatccaccgtt 285
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 agaaattaactataagtgaaactaacgatgatttacaagtgaatgagaagatccaccgtt 490

                                                                       
Query: 286 acaacttttctatagattgacttaatacttgaaggaaaataaccttcattagcggataca 345
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 acaacttttctatagattgacttaatacttgaaggaaaataaccttcattagcggataca 430

                                                                       
Query: 346 tataggtatttagcacattcgatgtttcaaactttgaggattgattaaacataaaaaagc 405
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tataggtatttagcacattcgatgtttcaaactttgaggattgattaaacataaaaaagc 370

                                                                       
Query: 406 atagttaggccgggcatggtggcgcatgcctttaatcccagcactcgggaggcagaggca 465
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 atagttaggccgggcatggtggcgcatgcctttaatcccagcactcgggaggcagaggca 310

                                                                
Query: 466 ggcagatttctgagttcgaggccagcctggtctacaaagtgagttccaggaca 518
           ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ggcggatttctgagttcgaggccagcctggtctacaaagtgagttccaggaca 257


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space:   461264
Effective search space used:   461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)