Query= MSMg01no383_g20.b1 MSMg01no383_g20.b1 CHROMAT_FILE:
MSMg01no383_g20.b1 PHD_FILE: MSMg01no383_g20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:29 2005
(486 letters)
>mm_chr8_26648830_26649715
Length = 886
Score = 648 bits (335), Expect = 0.0
Identities = 347/351 (98%)
Strand = Plus / Plus
Query: 4 ggaattcagcaaaatgtagacttgctgcctgtgagtctggatagaaaacgtcaggactga 63
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagcaaaatgtagacttgccgcctgtgagtctggatagaaaacgtcaggactga 263
Query: 64 aatttcaagtggttaattagcaaagaaaattgagtccaggactcagcctttcctccccca 123
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aatttcaaatggttaattagcaaagaaaattgagtccaggactcagcctttcctccccca 323
Query: 124 tggtccccacagagactgctaggctcaggctggttaccggcctcttccttcactgattct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tggtccccacagagactgctaggctcaggctggttaccggcctcttccttcactgattct 383
Query: 184 cccccatctatccaagtatattcctattttttccttgaccgtagcatgcaccatatatat 243
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cccccatctagccaagtatattcctattttttccttgaccgtagcatgcaccatatatat 443
Query: 244 gaccattgcttgtccctctccttttacatgaaatgcccacccgtccctgcccaacttttt 303
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 444 gaccattgcttgtccctctccttttacatgaaatgcccacccgtccccgcccaacttttt 503
Query: 304 ataattctttaatcatatgtacttaattcttacccttaagatttagtctgg 354
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ataattctttaatcatatgtacttaattcttacccttaagatttagtctgg 554
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space: 416976
Effective search space used: 416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_g20.g1 MSMg01no383_g20.g1 CHROMAT_FILE:
MSMg01no383_g20.g1 PHD_FILE: MSMg01no383_g20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:29 2005
(472 letters)
>mm_chr8_26820841_26821717
Length = 877
Score = 884 bits (457), Expect = 0.0
Identities = 470/477 (98%), Gaps = 5/477 (1%)
Strand = Plus / Minus
Query: 1 tgtaacaaagccaagcaggtcataagctaatgtctgtagcaca-----ttcctgccctgg 55
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 494 tgtaacaaagccaagcaggtcataagctaatgtctgtagcacagccctttcctgccctgg 435
Query: 56 gtggagtgccctgtacaactgacctttggccgcactcctagaaatccactacagttgtct 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gtggagtgccctgtacaactgacctttggccgcactcctagaaatccactacagttgtct 375
Query: 116 gctccgcagtggcacactgtcctgccgttgcccagacagtccaagttatagttaaacgtt 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gctccgcagtggcacactgtcctgccgttgcccagacagtccaagttatagttaaacgtt 315
Query: 176 aactccatccctgaaatacaggagaaacaaattattcacagtgatgttaggagggagaaa 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 aactccatccctgaaatacaggagaaacaaattattcacagtgatgttaggagggagaaa 255
Query: 236 cactgcctgacactttcatgtagacacacggttctgagacaaaggcttgtcccaggctgg 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 cactgcctgacactttcatgtagacacacggttctgagacaaaggcttgtcccaggctgg 195
Query: 296 caaggtggctcggggtgaaaacacttgccatgaaagcctgacaatgggacctggattcag 355
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 194 caaggtggctcggggtgaaagcgcttgccatgaaagcctgacaatgggacctggattcag 135
Query: 356 attccatggtgaagcagagtcctaggagttcctgccttgtcctcacaagcgcatataaat 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 attccatggtgaagcagagtcctaggagttcctgccttgtcctcacaagcgcatataaat 75
Query: 416 gcacgcatcacataactacagactcttccttccataccccatctcactaaaaacaat 472
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 gcacgcatcacataactacagactcttccttccataccccatctcactaaaaacaat 18
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 877
Length adjustment: 10
Effective length of query: 462
Effective length of database: 867
Effective search space: 400554
Effective search space used: 400554
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
