Query= MSMg01no383_o19.b1 MSMg01no383_o19.b1 CHROMAT_FILE:
MSMg01no383_o19.b1 PHD_FILE: MSMg01no383_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:06 2005
(424 letters)
>mm_chr8_122258772_122259595
Length = 824
Score = 762 bits (394), Expect = 0.0
Identities = 409/414 (98%), Gaps = 1/414 (0%)
Strand = Plus / Plus
Query: 12 gaattccatgtgtgccttgacacccccaccccctgcaaaaaa-taaaataaaaataaaaa 70
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 211 gaattccatgtgtgccttgacacccccaccccctgcaaaaaaataaaataaaaataaaaa 270
Query: 71 cttaccatgtttatcaaatatatgggcatggtacccaaggtcactgatggtccctccacc 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 cttaccatgtttatcaaatatatgggcatggtacccaaggtcactgatggtccctccacc 330
Query: 131 cctccctctccccctcaacctgcagacacctaaaacgccactgcagaagagcatggacaa 190
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 331 cctccctctccccctcaacctgcagacacctaaaacgccgctgcagaagagcatggacaa 390
Query: 191 gctgggcaagcagctaacgatcttttcctttggcatcatcggtgagtaaagtcggttctt 250
|||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 391 gctgggcaagcagctaacaatcttttcctttggcatcatcggtaagtgaagtcggttctt 450
Query: 251 gatgggttctgcagacccatcagggccacgtgggtgaaacttcagggactccgtgttggg 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gatgggttctgcagacccatcagggccacgtgggtgaaacttcagggactccgtgttggg 510
Query: 311 taccatacattactgggtgtctgggggtttccactgctgtgaagagacactgtgacgaaa 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 taccatacattactgggtgtctgggggtttccactgctgtgaagagacactgtgacgaaa 570
Query: 371 ggcaactcttacaatggataacatttaattggtgttggcttatggttgagatgt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ggcaactcttacaatggataacatttaattggtgttggcttatggttgagatgt 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_o19.g1 MSMg01no383_o19.g1 CHROMAT_FILE:
MSMg01no383_o19.g1 PHD_FILE: MSMg01no383_o19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:06 2005
(460 letters)
>mm_chr8_122452346_122453205
Length = 860
Score = 890 bits (460), Expect = 0.0
Identities = 460/460 (100%)
Strand = Plus / Minus
Query: 1 acaggtcatgcgtaaatccactgctgcacaggcaccactgtgtgtgtggtgaagacctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 acaggtcatgcgtaaatccactgctgcacaggcaccactgtgtgtgtggtgaagacctca 510
Query: 61 gttatatcctgctgagaatccatcaaaggacacagtagggcctgttaactggagctatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gttatatcctgctgagaatccatcaaaggacacagtagggcctgttaactggagctatgc 450
Query: 121 cacaccaaacatcatctggtgactgacaaggagacagcagggctgcttgcaactccatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cacaccaaacatcatctggtgactgacaaggagacagcagggctgcttgcaactccatcc 390
Query: 181 tgactcctcccttcccactggttcctgtgcatcagtgaatcccatcaagacgcacacagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tgactcctcccttcccactggttcctgtgcatcagtgaatcccatcaagacgcacacagc 330
Query: 241 acatccccctgccatgagatctattttcatgaggtatttcagtgagccattacaccaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 acatccccctgccatgagatctattttcatgaggtatttcagtgagccattacaccaaca 270
Query: 301 tatacaacgtcttgcttcggttttgtagctgaagccagcaggcgaggttctaacatcggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tatacaacgtcttgcttcggttttgtagctgaagccagcaggcgaggttctaacatcggt 210
Query: 361 gcactggatacgctagttccaggcaatccaatgccttcttatggcctccaagggtacaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gcactggatacgctagttccaggcaatccaatgccttcttatggcctccaagggtacaca 150
Query: 421 tgttggcaaaaacactgtgtgtgtgtgtgtgtgtgtgtgt 460
||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tgttggcaaaaacactgtgtgtgtgtgtgtgtgtgtgtgt 110
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
