Query= MSMg01no385_f13.b1 MSMg01no385_f13.b1 CHROMAT_FILE:
MSMg01no385_f13.b1 PHD_FILE: MSMg01no385_f13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:54 2005
(134 letters)
>mm_chr8_40455123_40455659
Length = 537
Score = 236 bits (122), Expect = 4e-67
Identities = 131/134 (97%), Gaps = 3/134 (2%)
Strand = Plus / Plus
Query: 1 ccctttgtttca-gaaagc-acaatttagtca-taataataaaggtacataaatctgttc 57
|||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 ccctttgtttcaagaaagccacaatttagtcaataataataaaggtacataaatctgttc 260
Query: 58 atcaagaaggattgctggacttttcgtcataccgagtttacagaactcgttgcttcaagt 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcaagaaggattgctggacttttcgtcataccgagtttacagaactcgttgcttcaagt 320
Query: 118 gatctctcaccttg 131
||||||||||||||
Sbjct: 321 gatctctcaccttg 334
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 134
Length of database: 537
Length adjustment: 8
Effective length of query: 126
Effective length of database: 529
Effective search space: 66654
Effective search space used: 66654
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no385_f13.g1 MSMg01no385_f13.g1 CHROMAT_FILE:
MSMg01no385_f13.g1 PHD_FILE: MSMg01no385_f13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:54 2005
(564 letters)
>mm_chr8_40618935_40619898
Length = 964
Score = 1091 bits (564), Expect = 0.0
Identities = 564/564 (100%)
Strand = Plus / Minus
Query: 1 catctgtggattgcattaagcagaaagatgtcatgatatggtagttagcctgaagacagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 catctgtggattgcattaagcagaaagatgtcatgatatggtagttagcctgaagacagg 705
Query: 61 ttttcctttacatcctcatattcctagtgcctgatacagtaagccctcaaagaggtgata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 ttttcctttacatcctcatattcctagtgcctgatacagtaagccctcaaagaggtgata 645
Query: 121 aatttataaacttatatccagataatgatcaggaataaatctttcatttgtgtgcaatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 aatttataaacttatatccagataatgatcaggaataaatctttcatttgtgtgcaatct 585
Query: 181 cttatgaattacagggttatgcacctacatttccacacacctcagtctattctctcatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 cttatgaattacagggttatgcacctacatttccacacacctcagtctattctctcatct 525
Query: 241 atgaagtcagcaaagtaagagattctgctgttcttgcacttagattctgatatacctgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 atgaagtcagcaaagtaagagattctgctgttcttgcacttagattctgatatacctgtg 465
Query: 301 agataacagctgtgataaccctctagaacctagacacatgacaaagaaaagagagttaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 agataacagctgtgataaccctctagaacctagacacatgacaaagaaaagagagttaca 405
Query: 361 tagtacttttcccccctggattatgcttattctttgtgttcttctggtcatagttgttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tagtacttttcccccctggattatgcttattctttgtgttcttctggtcatagttgttct 345
Query: 421 cttaacccagagaccacagccagccaaattgcataaacagcactcatctgttcccaaggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 cttaacccagagaccacagccagccaaattgcataaacagcactcatctgttcccaaggg 285
Query: 481 gacctctattaatcactctccagtattattgacaaaaatactcttatgaatggaaggatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gacctctattaatcactctccagtattattgacaaaaatactcttatgaatggaaggatt 225
Query: 541 tattttggaatggaaggatttatt 564
||||||||||||||||||||||||
Sbjct: 224 tattttggaatggaaggatttatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
