Query= MSMg01no385_i21.b1 MSMg01no385_i21.b1 CHROMAT_FILE:
MSMg01no385_i21.b1 PHD_FILE: MSMg01no385_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:09 2005
(453 letters)
>mm_chr8_48542815_48543667
Length = 853
Score = 864 bits (447), Expect = 0.0
Identities = 453/457 (99%), Gaps = 4/457 (0%)
Strand = Plus / Plus
Query: 1 tgtgaactaccatgtggttgttggggattgaacttaggacttctggaatagtagtcggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgaactaccatgtggttgttggggattgaacttaggacttctggaatagtagtcggtg 260
Query: 61 ttcttaaccactgagccatctctccagccccagaacatctattttaaagctcccatggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcttaaccactgagccatctctccagccccagaacatctattttaaagctcccatggat 320
Query: 121 gacctaacttgagcttcttacacatttccatgtcttttttacctaaaaaatttttatatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacctaacttgagcttcttacacatttccatgtcttttttacctaaaaaatttttatatg 380
Query: 181 gccccaggtaaacagataatacaaattaaacatttattgaaaataaatcatacagaaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gccccaggtaaacagataatacaaattaaacatttattgaaaataaatcatacagaaatt 440
Query: 241 cactttaacacaattttctgctaatatacatatttattataataaacaatatatatata- 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cactttaacacaattttctgctaatatacatatttattataataaacaatatatatatat 500
Query: 300 ---ctaatacaatcaataagtttactatttgtttattatttatagacaggcatggttgtg 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atactaatacaatcaataagtttactatttgtttattatttatagacaggcatggttgtg 560
Query: 357 tataccttgaatcccagcactgtggaggctgaggcagctagatctctatgagtttgaggc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tataccttgaatcccagcactgtggaggctgaggcagctagatctctatgagtttgaggc 620
Query: 417 tagcctggtctacatggcaagttccaggactgccaga 453
|||||||||||||||||||||||||||||||||||||
Sbjct: 621 tagcctggtctacatggcaagttccaggactgccaga 657
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_i21.g1 MSMg01no385_i21.g1 CHROMAT_FILE:
MSMg01no385_i21.g1 PHD_FILE: MSMg01no385_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:09 2005
(445 letters)
>mm_chr8_48662720_48663564
Length = 845
Score = 578 bits (299), Expect = e-169
Identities = 315/321 (98%), Gaps = 2/321 (0%)
Strand = Plus / Minus
Query: 1 tcttggtaggaattgaagcagcagtctttgggaaccacaatggcagcgtgaaacaaagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tcttggtaggaattgaagcagcagtctttgggaaccacaatggcagcgtgaaacaaagta 307
Query: 61 tcaggtccagagcttgatacagcagttctgggcattttctacagaaataccgacacaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tcaggtccagagcttgatacagcagttctgggcattttctacagaaataccgacacaaag 247
Query: 121 gcaaagatgcaacatggcttccaatggttaagaggtagaaacagactatgtttgtgttcc 180
||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 246 gcaaagatgcaacatggcttccaatggctaagaggtagaaacagactatgcctgtgttcc 187
Query: 181 atgaatatgtttcttacctacaaaggccaggaggcagctatatttccccttgagttggag 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 186 atgaatatgtttcttacctacaaaggccagaaggcagctatatttccccttgagttggag 127
Query: 241 ttataggtggttgtaaaccaccatgtggttgctaggaatagaacctgggtactttggaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ttataggtggttgtaaaccaccatgtggttgctaggaatagaacctgggtactttggaaa 67
Query: 301 acagccagtgttcttaaccac 321
||||||| ||||||||||||
Sbjct: 66 acagcca--gttcttaaccac 48
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
