Query= MSMg01no385_j06.b1 MSMg01no385_j06.b1 CHROMAT_FILE:
MSMg01no385_j06.b1 PHD_FILE: MSMg01no385_j06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:11 2005
(281 letters)
>mm_chr8_82622506_82623186
Length = 681
Score = 499 bits (258), Expect = e-146
Identities = 267/270 (98%), Gaps = 1/270 (0%)
Strand = Plus / Minus
Query: 13 gaattcttcaaagacgttcatctcaggctctccaggttcatctcaaacttacagggcttt 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gaattcttcaaagacgttcatctcaggctctccaggttcatctcaaacttacagggcttt 317
Query: 73 gagatgcttctgaggtctcaccttatagcctctcacctcaccacagtgtggaaatacaac 132
|||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 316 gagacgcttctgaggtctcaccttataacctctcacctcaccacagtgtggaaatacaac 257
Query: 133 agctctcaagtttagtaagatttctggagtttctttgtaactttaatttttcaagcagtt 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 agctctcaagtttagtaagatttctggagtttctttgtaactttaatttttcaagcagtt 197
Query: 193 cttaaaagctttaacctcccttgtaacccaccacccaccagaggtagtgaaaaagaaagg 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 cttaaaagctttaacctcccttgtaacccaccacccaccagaggtagtgaaaaagaaagg 137
Query: 253 ata-gggggtggggtggggaagtgaacctg 281
||| ||||||||||||||||||||||||||
Sbjct: 136 ataagggggtggggtggggaagtgaacctg 107
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no385_j06.g1 MSMg01no385_j06.g1 CHROMAT_FILE:
MSMg01no385_j06.g1 PHD_FILE: MSMg01no385_j06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:11 2005
(440 letters)
>mm_chr8_82460377_82461216
Length = 840
Score = 851 bits (440), Expect = 0.0
Identities = 440/440 (100%)
Strand = Plus / Plus
Query: 1 agttgatgggtggtctttatttcggtttgtcactctggcacttgggtaccaatacttaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agttgatgggtggtctttatttcggtttgtcactctggcacttgggtaccaatacttaat 260
Query: 61 attcatgactaaatccaaggagggaaaatgcttgaaattataatcttcttttgtgtttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attcatgactaaatccaaggagggaaaatgcttgaaattataatcttcttttgtgtttgg 320
Query: 121 agaagaatctagtttcagccaaacttttcgtttaaccagcatgttttaaccttccttagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaagaatctagtttcagccaaacttttcgtttaaccagcatgttttaaccttccttagg 380
Query: 181 ggaggaggcctagaattccaagtcctataaaatgtttacctttgcttcacttgctagact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaggaggcctagaattccaagtcctataaaatgtttacctttgcttcacttgctagact 440
Query: 241 ggcaggttttcagatatgtttccaaggcaaagacaagcagcatatttctctcaacaccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcaggttttcagatatgtttccaaggcaaagacaagcagcatatttctctcaacaccaa 500
Query: 301 acctcgcagaagcctgtgtatagcacagatacagctgttggaaacgctcaggcccagaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acctcgcagaagcctgtgtatagcacagatacagctgttggaaacgctcaggcccagaaa 560
Query: 361 cttcccaaatgtgatctgcccaggcacccctgtaaatgtctgcctttcacagacaggtgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttcccaaatgtgatctgcccaggcacccctgtaaatgtctgcctttcacagacaggtgc 620
Query: 421 ttctctgtgtgagcacctcc 440
||||||||||||||||||||
Sbjct: 621 ttctctgtgtgagcacctcc 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
