XXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCTGATTTCTTGCA
AGTTGTTGATTAAGGGTAACTCAGAGTCTGATACCTTCCATTGTCACACT
TCAGGTCACTTCTCACAGGTACTTTCCAAGGATATAGGAGGCTTTTTCAA
TTAACTAACATGCCTCATTACCAGAGAGACTGTCCTGGTAATAAGGGTGT
CAGGACGCCCAACATATATATACGTATATACATATATGCACATATATATA
TATACATATATACATACATACATATATACATACATACATACGTACATACG
TACATACATACATATATACATATATGCATATACATATACACATATTCATA
TATACACATGTATGTGTATGTATCAGGTCTATCATGTTTTGCAGGATTTT
GTGACAATTCTTGTAATTTCTTTTCATAGTGAGTAAAAGAATGAGAAATC
AGTAAATAGTTTTTAGATTCACTTTTTAAGTGTGTGTGTTTGTTGATGTG
TGGGAATATGCATTTGAGTGCAAATATACTAGGAGTCCAGCGGGGTTGGA
TCCCTTGTGCCGTTACAATCTGTTGGGAGTCTGTGCACTTTCTAGGAACA
CAAATTTGGTCGGGCCTCCTATACTTCCGTTAATAGCCTTAATTACTGGG
TTCTCCTGTCCCCTTTTTGGGCCCCTTTAATAGTCCAACCTCTCACAAGG
ATAACCCAGGCCTCTTGGCGTATTCAAATTCAATATATCCCGTATTGGTT
CCTTCCTTTTCCCTTTTATGCCATCCTCCN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCTTAATTGCCTAGTCTTTCTCTGGGGTTGGGGTCCCATGAGATTT
CCTTCTTCCATGTTAGCATGTCCAGTGTGGCCTCCTTGTTCAGATCCTTT
ATCAGATCACACATGTGATGGGACTTCATGAGTGTAGCTTCTGACAGATC
TAGGAGACACAGTCTCACAAAAAAAATCTCTGGATCCTCAGTCGTTTCCA
GTCTTGCTGCCTATCTTCTGTAGTGATCCCAGAGGCGTCGATGTAGGAGT
CATGTTCCAGATGTATCAGTTGGGGCTGTGCACCACCTGATGACTTACAT
TCCACATTTTGATAGGTTATCGTTTTCTGTAAGGTGCAAGGAGTCATTTC
TTAAGCAAGGGTGAGGTCTACACTTGCATGTAAATATAGTGAATGAACAA
CAGATGAGAAAGAACAGGTTGCCTGTGTCTTTCTGAATCTGGGTTATCTT
ACTTAATAAGATCTTTTCCACACTCATTTACTTATTTGCAAATTTCATAA
TTTCCATTTTCATGAAGCTAAAGACTATTTCTTAATAAATATTTTCATTG
TCCATATATCTTTTGCCCAAATTTTTTTTTGTTTTCCTTTTGCTCACCTC
TGGTGATCTTAGCCTCCTTCGATCTTTTTCTCGGTCGCTCTTTTTGGTTT
TATTCCTTTTGTTCATTTCTCTTTTACCCTCCCATTTACCCATCTGTCTC
TCTATATATTTTTTCTTTTTCCACCTG

Query= MSMg01no385_n08.b1 MSMg01no385_n08.b1 CHROMAT_FILE:
MSMg01no385_n08.b1 PHD_FILE: MSMg01no385_n08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:31 2005
         (491 letters)



>mm_chr8_64407718_64408608
          Length = 891

 Score =  862 bits (446), Expect = 0.0
 Identities = 482/506 (95%), Gaps = 22/506 (4%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctctgatttcttgcaagttgttgattaagggtaactcagagtctgataccttcc 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ggaattctctgatttcttgcaagttgttgattaagggtaactcagagtctgataccttcc 249

                                                                       
Query: 64  attgtcacacttcaggtcacttctcacag------gtactttccaaggatataggaggct 117
           |||||||||||||||||||||||||||||      |||||||||||||||||||||||||
Sbjct: 250 attgtcacacttcaggtcacttctcacaggtggctgtactttccaaggatataggaggct 309

                                                                       
Query: 118 ttttcaattaactaacatgcctcattaccagagagactgtcctggtaataagggtgtcag 177
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ttctcaattaactaacatgcctcattaccagagagactgtcctggtaataagggtgtcag 369

                                                                       
Query: 178 gacgcccaacatatatatacgtatatacatatatgcacatatatatatatacatatatac 237
           |||||||||||||||||||||||||||||||||||||    |||||||||||||||||||
Sbjct: 370 gacgcccaacatatatatacgtatatacatatatgca----tatatatatacatatatac 425

                                                                       
Query: 238 atacatacatatatacatacatacatacgtacatacgtacatacatacata----tatac 293
           |||||||||||||||||||||||||||||||||||||||||||||||||||    |||||
Sbjct: 426 atacatacatatatacatacatacatacgtacatacgtacatacatacatacatatatac 485

                                                                       
Query: 294 atatatgcatatacatatacacatat--------tcatatatacacatgtatgtgtatgt 345
           ||||||||||||||||||||||||||        ||||||||||||||||||||||||||
Sbjct: 486 atatatgcatatacatatacacatatacacatattcatatatacacatgtatgtgtatgt 545

                                                                       
Query: 346 atcaggtctatcatgttttgcaggattttgtgacaattcttgtaatttcttttcatagtg 405
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 atcaggtctatcatgttttgcaggattttgtgacaattcttgtaatttcttttcatagtg 605

                                                                       
Query: 406 agtaaaagaatgagaaatcagtaaatagtttttagattcactttttaagtgtgtgtgttt 465
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 606 agtaaaagaatgagaaatcagtaaatagcttttagattcactttttaagtgtgtgtgttt 665

                                     
Query: 466 gttgatgtgtgggaatatgcatttga 491
           ||||||||||||||||||||||||||
Sbjct: 666 gttgatgtgtgggaatatgcatttga 691


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space:   423761
Effective search space used:   423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)