Query= MSMg01no387_j05.b1 MSMg01no387_j05.b1 CHROMAT_FILE:
MSMg01no387_j05.b1 PHD_FILE: MSMg01no387_j05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:40 2005
(174 letters)
>mm_chr8_95379092_95379665
Length = 574
Score = 282 bits (146), Expect = 6e-81
Identities = 165/172 (95%), Gaps = 4/172 (2%)
Strand = Plus / Plus
Query: 5 gaattcggccgct-t-ttcccgggtccccgctttgctcgggtcgggcacctggatccatc 62
||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcggccgctctcttc--gggtccccgctttgctcgggtcgggcacctggatccatc 262
Query: 63 atgaaccgatgcgccgaggcggccgctgtggcggctacggtcccgggttcgggcgtcggg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atgaaccgatgcgccgaggcggccgctgtggcggctacggtcccgggttcgggcgtcggg 322
Query: 123 gacgccgggctgccaccacccatggtatctcgccaggcgtccttcttcccgc 174
||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 323 gacgccgggctgcggccacccatggtacctcgccaggcgtccttcttcccgc 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 574
Length adjustment: 8
Effective length of query: 166
Effective length of database: 566
Effective search space: 93956
Effective search space used: 93956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no387_j05.g1 MSMg01no387_j05.g1 CHROMAT_FILE:
MSMg01no387_j05.g1 PHD_FILE: MSMg01no387_j05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:40 2005
(371 letters)
>mm_chr8_95580418_95581188
Length = 771
Score = 710 bits (367), Expect = 0.0
Identities = 370/371 (99%)
Strand = Plus / Minus
Query: 1 tatttgattctgtttccaggaaccctaatggggagggcctgcctcactggccagaatatg 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 571 tatttgattctgtttccaggaaccctaatggggagggtctgcctcactggccagaatatg 512
Query: 61 atgagaaggaagggtatctacagattggagccactacccagcaagcccagagactgaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 atgagaaggaagggtatctacagattggagccactacccagcaagcccagagactgaaag 452
Query: 121 cagaggaagtggctttctggactgagctcctggctaagaatccacctgagacagacccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 cagaggaagtggctttctggactgagctcctggctaagaatccacctgagacagacccta 392
Query: 181 ctgagcacagagaacacaaatgaatgggaggctctgccagtctcaggaccagaggagcga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ctgagcacagagaacacaaatgaatgggaggctctgccagtctcaggaccagaggagcga 332
Query: 241 agatggaactattccacaaaggatgactattcaccaaagatggatcttacagaggaaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 agatggaactattccacaaaggatgactattcaccaaagatggatcttacagaggaaact 272
Query: 301 gcacacttgtacagtggagatatttgtatctcaacttgaaagtaaatttccttttagaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gcacacttgtacagtggagatatttgtatctcaacttgaaagtaaatttccttttagaaa 212
Query: 361 tcaaatcaggg 371
|||||||||||
Sbjct: 211 tcaaatcaggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
