Query= MSMg01no387_m01.b1 MSMg01no387_m01.b1 CHROMAT_FILE:
MSMg01no387_m01.b1 PHD_FILE: MSMg01no387_m01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:54 2005
(401 letters)
>mm_chr8_60118975_60119775
Length = 801
Score = 760 bits (393), Expect = 0.0
Identities = 399/401 (99%), Gaps = 2/401 (0%)
Strand = Plus / Plus
Query: 1 tgtaaaacctttcaaacaagattgtaaagaaaacgagtgctaagacttacatagcttacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtaaaacctttcaaacaagattgtaaagaaaacgagtgctaagacttacatagcttacc 260
Query: 61 ttgctgtattagagattaaaagattaattcttgaggattagttgaattttaagaagcata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgctgtattagagattaaaagattaattcttgaggattagttgaattttaagaagcata 320
Query: 121 ataatcaaattatctaacaaaagttgcatggcaaaatgctgagtttgccacaggaaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataatcaaattatctaacaaaagttgcatggcaaaatgctgagtttgccacaggaaaaaa 380
Query: 181 ttgcagaggttatagatatttcagccattgcaaatcagaacaagagaacctgtcttctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgcagaggttatagatatttcagccattgcaaatcagaacaagagaacctgtcttctgg 440
Query: 241 gactggggctgaggccggggctggggctgggcctgagttggtacagtgatagccaagtat 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gactggggctgaggccggg-ctggggctgggcctgagttggtacagtgatagccaagtat 499
Query: 301 gcaccaagccaagcacgggttcagtccccagcgctatataaacccggtgtggtggcatgc 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gcaccaagccaagc-cgggttcagtccccagcgctatataaacccggtgtggtggcatgc 558
Query: 361 ctgtaagctcagctctcaagaattatagagaggaagacctg 401
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ctgtaagctcagctctcaagaattatagagaggaagacctg 599
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space: 310464
Effective search space used: 310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no387_m01.g1 MSMg01no387_m01.g1 CHROMAT_FILE:
MSMg01no387_m01.g1 PHD_FILE: MSMg01no387_m01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:54 2005
(474 letters)
>mm_chr8_60258822_60259695
Length = 874
Score = 893 bits (462), Expect = 0.0
Identities = 471/474 (99%)
Strand = Plus / Minus
Query: 1 accctctccctgtacagccacaaatctcaggtcttttccaaggactgtgtgctgcccctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 accctctccctgtacagccacaaatctcaggtcttttccaaggactgtgtgctgcccctc 615
Query: 61 caggtgtgtcatgttttgttgtaggaaccttcttcttgtgatatatgctgctctcccttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 caggtgtgtcatgttttgttgtaggaaccttcttcttgtgatatatgctgctctcccttt 555
Query: 121 atatctttggtatgaggacattttgtgaccccaggcctgggctggaatgttttgtacagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 atatctttggtatgaggacattttgtgaccccaggcctgggctggaatgttttgtacagc 495
Query: 181 ttgttcattcttttaactctcagactctatgtaaagatggaaggtaataaggtatagtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ttgttcattcttttaactctcagactctatgtaaagatggaaggtaataaggtatagtac 435
Query: 241 cgatgtgttaacacacaaggtgtcacacagatgtcactcaagtctgtggccagccttgaa 300
||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 434 cgatgtgggaacacacaaggtgtcacacagctgtcactcaagtctgtggccagccttgaa 375
Query: 301 atagtgtagctctcagggaactacagaaaaagcctcacccatgctcatctgcatacattg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 atagtgtagctctcagggaactacagaaaaagcctcacccatgctcatctgcatacattg 315
Query: 361 attgattttgaagggcagttcaggaaacattcgacatcccctgctcaacgatgtcataga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 attgattttgaagggcagttcaggaaacattcgacatcccctgctcaacgatgtcataga 255
Query: 421 caaggtaatgtaaaggtgacattgaccagccaaggctgtatgccatgccttttg 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 caaggtaatgtaaaggtgacattgaccagccaaggctgtatgccatgccttttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
