Query= MSMg01no388_a23.b1 MSMg01no388_a23.b1 CHROMAT_FILE:
MSMg01no388_a23.b1 PHD_FILE: MSMg01no388_a23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:18 2005
(229 letters)
>mm_chr8_28182434_28183062
Length = 629
Score = 362 bits (187), Expect = e-104
Identities = 218/235 (92%), Gaps = 12/235 (5%)
Strand = Plus / Minus
Query: 1 aaagacaaaaattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 60
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aaagacaaaaat------tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 405
Query: 61 aaacccaggtccttgtatgtgtgacataaacataattaccctaagctacattcccagccc 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 404 aaacccaggtccttgtatgtgtgagataaacataattaccctaagctacattcccagccc 345
Query: 121 agtcacctggagattttatgtaacaattatatttattctgagaacatgtgatgtgttata 180
||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 344 agtcacctggagactttatgtaacaattatatttattctgaggacatgtgatatgttata 285
Query: 181 ggctatattatttgtgtgtgtgtg------gtgttggtctcactatgtacaatag 229
|||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 284 ggctatattatttgtgtgtgtgtgtgtggtgtgttggtctcattatgtacaatag 230
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no388_a23.g1 MSMg01no388_a23.g1 CHROMAT_FILE:
MSMg01no388_a23.g1 PHD_FILE: MSMg01no388_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:18 2005
(262 letters)
>mm_chr8_28001477_28002138
Length = 662
Score = 476 bits (246), Expect = e-139
Identities = 258/262 (98%)
Strand = Plus / Plus
Query: 1 ctgataactacagctgaggaccatcagtcacttaccaaacgatttcactggaaccttgtg 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 ctgataactacagctgaggaccatcagtcacctaccaaacgatttcactggaaccttgtg 260
Query: 61 ttcattaattacttcataacaaaaacaagctaatttttactgcccagttcttacaggtga 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 ttcattaattacttcataacaaaaacaagctaatttttactgtccagttcttacaggtga 320
Query: 121 taaaagtgagtcctgagtgtccgattgtctcctggagacatacatatattaataagcggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 taaaagtgagtcctgagtgtccgattgtctcctggagacatacatatattaataagcagt 380
Query: 181 gtttgagacccagttctgagccagatgctcctccactggccatgcatgtccccaggacac 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtttgaggcccagttctgagccagatgctcctccactggccatgcatgtccccaggacac 440
Query: 241 ccaacattcatctactgagcca 262
||||||||||||||||||||||
Sbjct: 441 ccaacattcatctactgagcca 462
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 262
Length of database: 662
Length adjustment: 9
Effective length of query: 253
Effective length of database: 653
Effective search space: 165209
Effective search space used: 165209
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
