Query= MSMg01no388_d13.b1 MSMg01no388_d13.b1 CHROMAT_FILE:
MSMg01no388_d13.b1 PHD_FILE: MSMg01no388_d13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:30 2005
(609 letters)
>mm_chr8_91237005_91238015
Length = 1011
Score = 1151 bits (595), Expect = 0.0
Identities = 604/607 (99%), Gaps = 2/607 (0%)
Strand = Plus / Minus
Query: 5 gaattctttcc-aatttc-ccatctattcagctgctgaaaaggaatctttcctacgtgct 62
||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 gaattctttccaaatctcaccatctattcagctgctgaaaaggaatctttcctacgtgct 653
Query: 63 ggaaatgttaattctgtcccacaaatagaggtaattgagcaagaaaataaataaataaac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 ggaaatgttaattctgtcccacaaatagaggtaattgagcaagaaaataaataaataaac 593
Query: 123 taaggaactaaagagagactcttcatgctttttacccctcaagaaaacagtgttaatgat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 taaggaactaaagagagactcttcatgctttttacccctcaagaaaacagtgttaatgat 533
Query: 183 acaaaagatatagatgaaggcttattcaaattaaattaattttcatctaaacaactttac 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 acaaaagatatagatgaaggcttattcaaattaaattaattttcatctaaacaactttac 473
Query: 243 cttttaaaagtctatttgcaagctttattttgttggcaaataagtataatttatgtgtat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 cttttaaaagtctatttgcaagctttattttgttggcaaataagtataatttatgtgtat 413
Query: 303 aaaagcagtatcattcttaattatcttctattcaagatttatgaatatcaatagttttga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aaaagcagtatcattcttaattatcttctattcaagatttatgaatatcaatagttttga 353
Query: 363 aagagaaaaagcattcttttcctttctcatgactgctctaaaccagcaatgatgttaata 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 aagagaaaaagcattcttttcctttctcatgactgctctaaaccagcaatgatgttaata 293
Query: 423 acaagcaaggatcttcaagatccctgtcatgggactcttacatcatgaaacgtacgtggt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 acaagcaaggatcttcaagatccctgtcatgggactcttacatcatgaaacgtacgtggt 233
Query: 483 tttctcttgttgttgatggttttgctactttaattctatattagtatttaaataaaatat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 tttctcttgttgttgatggttttgctactttaattctatattagtatttaaataaaatat 173
Query: 543 aatttaaatgtttttaatataagtactataaaaaaggaaaaataaattttacttgtaagg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 aatttaaatgtttttaatataagtactataaaaaaggaaaaataaattttacttgtaagg 113
Query: 603 ataaacc 609
|||||||
Sbjct: 112 ataaacc 106
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1011
Length adjustment: 10
Effective length of query: 599
Effective length of database: 1001
Effective search space: 599599
Effective search space used: 599599
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_d13.g1 MSMg01no388_d13.g1 CHROMAT_FILE:
MSMg01no388_d13.g1 PHD_FILE: MSMg01no388_d13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:30 2005
(188 letters)
>mm_chr8_91018999_91019586
Length = 588
Score = 364 bits (188), Expect = e-105
Identities = 188/188 (100%)
Strand = Plus / Plus
Query: 1 gagacaaaggggccttcatgttcaaaggccagcaagacgttcatcctccattctccacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagacaaaggggccttcatgttcaaaggccagcaagacgttcatcctccattctccacaa 260
Query: 61 acaaacagggcggctttgatccgagtgtgggtggaggcagccgctccaattaggagattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaaacagggcggctttgatccgagtgtgggtggaggcagccgctccaattaggagattg 320
Query: 121 gcccgtgactgggctaaagaatgtttgcagtaaaataaaagatctaagtggtcgtaatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcccgtgactgggctaaagaatgtttgcagtaaaataaaagatctaagtggtcgtaatga 380
Query: 181 agggtaat 188
||||||||
Sbjct: 381 agggtaat 388
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 188
Length of database: 588
Length adjustment: 8
Effective length of query: 180
Effective length of database: 580
Effective search space: 104400
Effective search space used: 104400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
