Query= MSMg01no388_n13.b1 MSMg01no388_n13.b1 CHROMAT_FILE:
MSMg01no388_n13.b1 PHD_FILE: MSMg01no388_n13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:16 2005
(172 letters)
>mm_chr8_80945248_80945820
Length = 573
Score = 304 bits (157), Expect = 2e-87
Identities = 166/169 (98%), Gaps = 3/169 (1%)
Strand = Plus / Minus
Query: 5 gaattctctttt-tttctcgatttattttgctgagttttcttagaaggagaaag-atggg 62
|||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 372 gaattctcttttcttt-tcgatttattttgctgagttttcttagaaggagaaagaatggg 314
Query: 63 ccctgacccagcatcatttgtgggataacttgatattgtagtttctttcttcacagctcc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ccctgacccagcatcatttgtgggataacttgatattgtagtttctttcttcacagctcc 254
Query: 123 gcccctgtttagcacctagttctggagatatacctctttattccccact 171
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gcccctgtttagcacctagttctggagatatacctctttattccccact 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 172
Length of database: 573
Length adjustment: 8
Effective length of query: 164
Effective length of database: 565
Effective search space: 92660
Effective search space used: 92660
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no388_n13.g1 MSMg01no388_n13.g1 CHROMAT_FILE:
MSMg01no388_n13.g1 PHD_FILE: MSMg01no388_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:16 2005
(439 letters)
>mm_chr8_80741569_80742407
Length = 839
Score = 849 bits (439), Expect = 0.0
Identities = 439/439 (100%)
Strand = Plus / Plus
Query: 1 tcttcttcaagtgtaactgtgacaatctccctcaggtggatggctctgtattcacatact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttcttcaagtgtaactgtgacaatctccctcaggtggatggctctgtattcacatact 260
Query: 61 ttgcataaggacagactttttacaacaggactgtgtggcctggaggccctgacctaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgcataaggacagactttttacaacaggactgtgtggcctggaggccctgacctaagag 320
Query: 121 gggctcaacttctggacatttcattaaggtacttgcctttgaagccctgtgttggccctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggctcaacttctggacatttcattaaggtacttgcctttgaagccctgtgttggccctg 380
Query: 181 agatatcctgaggttgctatacaatgagaaaacccaagatatatgaccacaatacatgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agatatcctgaggttgctatacaatgagaaaacccaagatatatgaccacaatacatgta 440
Query: 241 tgtgttctagaaaataactctgtttgggtcccagatgatagcccttaccacctgatagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgttctagaaaataactctgtttgggtcccagatgatagcccttaccacctgatagat 500
Query: 301 gtgtggagctaagtcctgtccctagtggggatacttgagcctctaagcatgcagaagagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgtggagctaagtcctgtccctagtggggatacttgagcctctaagcatgcagaagagg 560
Query: 361 taagtcattaagagtcaaagaaaagctaccacttttacatcctatctaaattcttgacgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taagtcattaagagtcaaagaaaagctaccacttttacatcctatctaaattcttgacgc 620
Query: 421 attcaatgtgtgagaaaga 439
|||||||||||||||||||
Sbjct: 621 attcaatgtgtgagaaaga 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
