NCTTCTCTCTATAATTTGGGCGCTAAANGAATACTAATTCCAACACACCG
CGGAATTCCTGATCTTCCCACAACTTTTATCATGAATGGGTGTTGGATCT
TGTCAAATGCTTTCTCAGCATCTAACGAGATGATCATGTGGTTTTTGTCT
TTGAGTTTGTTTATATAGTGGATTACGTTGATGGATTTTCGTATATTAAA
CCATCCCTGCATCCCTGGAATAAAACCTACTTGGCCAGGATGGATGATTG
CTTTATTGTGCTCTTGGATTCGGTTAGCGAGAATTTTATTGAGGATTTTT
GCATCGATATTCATAACACAATTTTTCTTGACGTTCTCTATCTTTGCTGC
ATTCTTCTGCGTTTTACCTATCACAGTAATAGCGCCTTCCTCAAATGCGT
TGTCCATAGTACTTTCTACTTCCATCTTGTCCACAAGCTTGTGTACACCT
GCCCTCACATCCTCTCTCACTCCCCGATACATCTCTGCTCTAAATCCCCT
CCGCTCCTGTCCCCCCTTCCCTCTGCTCCACTATCCCCTCCTCGCTCCTC
CCCCCTCCCTTTTCCACGCTCTCGTCTCATCTAGCCCTCCCTTGCTTTCT
GACCCTCCTCTTTCTCTCTCCGCTTTTCCCTTTTTTCCTCTCTTCTCCTC
CCCTTCTTTTCCCCCTTCCCCCCTTTTTTGTCCTTCCTTCTTCCTCCCCT
TGCTTCCCCCCGCTCCCTTTCCTTGTCCCTCCCTCTCTTTTTTCCTACTC
CCCTTTTCTCCCCCACCTTCCTTCCCCTTCTTCG

NNCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTCCCGAAATATCCCCCATCAGATTCATTGACTCCC
TGACTCAAGAGTGTATTTAGCTTTGTAATGAAGGGTACCAGCTTCTCCTA
CATGATATGCACAATACTAAGACTGGGGGAAAAAAAAACCAAAATGGCAC
AGATTCCAGTAGATTCTTTACTCACGGGTTGCAGCTCGTGTTTGTAGGTG
ACACGTTTAGATCAATCACTTTGTTTTTGCTGCCTATCCTATTGACTTCC
CTCTTCAGCATCAGATGCTTCCAGAGATTTTGCTCAACCAGCATCCACAA
CTCATATTTACAGCAGGCAATCGATCAATTGATCAGTAAACAGACACAGA
CACCTAACTTGCAGCTAACCTTGAGTTCACTAATGAATTATTCTATAGCT
CCCCCTAAATTAAAGAGTAAGCCAGCATACCCAGTGCTTTCCTGGAGATA
CTCCCCCAAATACATAGCCTAGGTAGAGAAATAAAGAGCACCGTAGTTAG
AAAGAAAGATGCTAGAATACTCATAATCTCAAATATCATGATCATTGATA
TAGACATATATATTGAATCCCCATCAAATGATACTAGAACGCATAAGTTT
AACGCATAAACACCAAGAATTTAATCAAAACAAGTGAAAGTTCCTTAAAA
TGTAAAAAAAAAAAAAAACCTCTTATAATCTCTAAAAAATGCAAGTCCAA
G

Query= MSMg01no389_i08.g1 MSMg01no389_i08.g1 CHROMAT_FILE:
MSMg01no389_i08.g1 PHD_FILE: MSMg01no389_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:09 2005
         (543 letters)



>mm_chr8_115543529_115544471
          Length = 943

 Score =  959 bits (496), Expect = 0.0
 Identities = 535/556 (96%), Gaps = 15/556 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccccatcagattcattgactccctgactcaagagtgtatttagctttgtaatgaagggta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ccccatcagattcattgactccctgactcaagagtgtatttagctttgtaatgaagggta 249

                                                                       
Query: 61  ccagcttctcctacatgatatgcacaatactaagactgggggaaaaaaaaa-ccaaaatg 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 250 ccagcttctcctacatgatatgcacaatactaagactgggggaaaaaaaaaaccaaaatg 309

                                                                       
Query: 120 gcacagattccagtagattctttactcacgggttgcagctcgtgtttgtaggtgacacgt 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcacagattccagtagattctttactcacgggttgcagctcgtgtttgtaggtgacacgt 369

                                                                       
Query: 180 ttagatcaatcactttgtttttgctgcctatcctattgacttccctcttcagcatcagat 239
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 370 ttagatcaatcactttgtttttactgcctatcctattgacttccctcttcagcatcagat 429

                                                                       
Query: 240 ------------gcttccagagattttgctcaaccagcatccacaactcatatttacagc 287
                       |||| |||||| |  |||||||||||||||||||||||||||||||||
Sbjct: 430 atacaatcagatgctttcagagact--gctcaaccagcatccacaactcatatttacagc 487

                                                                       
Query: 288 aggcaatcgatcaattgatcagtaaacagacacagacacctaacttgcagctaaccttga 347
           ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aggcaattgatcaattgatctgtaaacagacacagacacctaacttgcagctaaccttga 547

                                                                       
Query: 348 gttcactaatgaattattctatagctccccctaaattaaagagtaagccagcatacccag 407
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 gttcactaatgaattattctatagctccccctaaattaaagagtaagccagcatacccag 607

                                                                       
Query: 408 tgctttcctggagatactcccccaaatacatagcctaggtagagaaataaagagcaccgt 467
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 608 tgctttcctggagatactcccccaaatacatagcctaggtagagaaataaagagcactgt 667

                                                                       
Query: 468 agttagaaagaaagatgctagaatactcataatctcaaatatcatgatcattgatataga 527
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 agttagaaagaaagatgctagaatactcataatctcaaatatcatgatcattgatataga 727

                           
Query: 528 catatatattgaatcc 543
           ||||||||||||||||
Sbjct: 728 catatatattgaatcc 743


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space:   497289
Effective search space used:   497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)