TCTCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCATTGGCATTCCCAAACTGTTAGCACAGTCACTAAAATCAATAA
TAAATGGGACCCCAAGAAGCCCTTCAGAGTCCTTAAAAGGACTCTATCAT
TTAGACAAAGCAATTTCTTATGGAATAGGAAAAAAAGTTTTACCAACCAC
ACATCTTAGGAATGGATAATATCCAAATTATATGAAGAATACATAAAAGC
GTATGTTAGGAATTAAGTCATCCAATAAACAATGGCGTACAGATCTAATC
AGAGAATTCTCACAAGAAAAAACTCATATGGCTGAGAAAGACTTAAAATG
TTCAAAATCCTTATTCATCAGGAAAATGCAAATCTAAGCTATTTTGAGAT
TTAATCTTACACCCATAAGGATAGCTAAGATAAATAAAACAAGTGACAGC
TTTATTGCGGAGGATGTGGAGCAAGAAGAGTACATACTTGTACAGCCATT
ATGGAGACCACTGTGCACGTCTCTCACGAAGCTGCCAATAACTCTACCTC
CAGATACCCTTGCCTAATCATGTTCCTTTGCCCTTCCCGCCCTACCACCT
CTAACCCCGCCCACCCATCCCGTCGCCCCTCCCCCTACTGGCCTACCTAA
TCCCGCCCCTTCTCCCACGGCCTTTTTTACCCTTCTTCTTCCCCTACCCC
GAACACCCCCCCCCCTCCCCCTCCCCCTCCCATCCCCCTTCCTTCCCCCC
CTTCCTTTCCCTTTCGCTTCCCGCCTCCCCTCCCCCTTCCC

CCCCCCCCCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCACAGCCTGGCATGAACC
AATTTTTACTAAGAGTTTTACTAAGTTTATGAAAAAAAAATCCATGGATA
AGACCTAATTTTTCTTTTAATAATGGCATCAGGGAGGATTATGGTGTAGT
GAGTAAATGTTATGTAATTATGCTGTATGTATTTAAAGCACTTGTAAATT
GTAAAATACTGGCTCTAAAATGTTGTAATTTACTTGAGTGTTTGATTAAG
CAATTTTTGGAAAGAAATTCTCTTAAATATATTTTATCCTCAAAATTCCA
GTTGCGACCTGATGATACAAAACAGTCACATTTATTATATATGCACAACA
AAGACTATAAATGTAAGAACATGTAGGCTAATATTTCTGTTCATATCTCA
AGTCAACATCAAAATTATGAGCAAAATACTGTCAAATTAATCACACATTT
TCTTCTGTGTTAGATGGTTATTGTAAACATCATATCTTTTTGTTCATTGA
CAAAACTTGAATCATAAAGGGAGGTTTATTAAACCCATAACTCTCCAGTG
GATACCTACGTACTCCTGGACACCCCCCAAATCCTAGTGGATAACAAAGG
GAAAGAAGAACCACATAATGAGGGTAAAAAAGGTGAACAAAAAGGGTAAA
TGCCTTCTTCTTTTTCCCTTTTCTCTTCCTCTCNACTTGTTCTCGTATCC
C

Query= MSMg01no389_l16.g1 MSMg01no389_l16.g1 CHROMAT_FILE:
MSMg01no389_l16.g1 PHD_FILE: MSMg01no389_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:26 2005
         (488 letters)



>mm_chr8_58008822_58009707
          Length = 886

 Score =  816 bits (422), Expect = 0.0
 Identities = 471/488 (96%), Gaps = 2/488 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cacagcctggcatgaaccaatttttactaagagttttactaagtttatgaaaaaaaaatc 60
           |||||||||||||||||||||||||||||||||||||||||| ||||   ||||||||||
Sbjct: 686 cacagcctggcatgaaccaatttttactaagagttttactaacttta--caaaaaaaatc 629

                                                                       
Query: 61  catggataagacctaatttttcttttaataatggcatcagggaggattatggtgtagtga 120
           |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 catgtataagacctattttttcttttaataatggcatcagggaggattatggtgtagtga 569

                                                                       
Query: 121 gtaaatgttatgtaattatgctgtatgtatttaaagcacttgtaaattgtaaaatactgg 180
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 568 gtaaatgttatgtaattatgctgtatggatttaaagcacttgtaaattgtaaaatactgg 509

                                                                       
Query: 181 ctctaaaatgttgtaatttacttgagtgtttgattaagcaatttttggaaagaaattctc 240
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 atctaaaatgttgtaatttacttgagtgtttgattaagcaatttttggaaagaaattctc 449

                                                                       
Query: 241 ttaaatatattttatcctcaaaattccagttgcgacctgatgatacaaaacagtcacatt 300
           |||||| |||   ||| ||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 448 ttaaatttatgaaatcttcaaaattccagttgtgacctgatgatacaaaacattcacatt 389

                                                                       
Query: 301 tattatatatgcacaacaaagactataaatgtaagaacatgtaggctaatatttctgttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tattatatatgcacaacaaagactataaatgtaagaacatgtaggctaatatttctgttc 329

                                                                       
Query: 361 atatctcaagtcaacatcaaaattatgagcaaaatactgtcaaattaatcacacattttc 420
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 328 atatctcaagtcaacatcaaaatcatgagcaaaatactgtcaaattaatcacacattttc 269

                                                                       
Query: 421 ttctgtgttagatggttattgtaaacatcatatctttttgttcattgacaaaacttgaat 480
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ttctgtgttagagggttattgtaaacatcatatctttttgttcattgacaaaacttgaat 209

                   
Query: 481 cataaagg 488
           ||||||||
Sbjct: 208 cataaagg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 886
Length adjustment: 10
Effective length of query: 478
Effective length of database: 876
Effective search space:   418728
Effective search space used:   418728
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)