Query= MSMg01no390_i08.b1 MSMg01no390_i08.b1 CHROMAT_FILE:
MSMg01no390_i08.b1 PHD_FILE: MSMg01no390_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:27 2005
(246 letters)
>mm_chr8_61139192_61139837
Length = 646
Score = 406 bits (210), Expect = e-118
Identities = 231/238 (97%)
Strand = Plus / Plus
Query: 5 ttttattactaatggaattcaacagtttttatagtatatatcactatgaagtggtttgtt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ttttattactaatggaattcaacagtttttatagtatatatcactatgaagtggtttgtt 264
Query: 65 gtttgtatgttttttacttatctttcttctttctttaaaggctatgtatttacttctctt 124
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 265 gtttgtatgttttttacttatctttcttctttctttaaaggctatgtatttatttctctt 324
Query: 125 taaaatttgttttattgtatgcatatgattatttgcatgtatgcatatgcactgtgtgtt 184
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 325 taaaaattgttttattgtatgcatatgattatttgcatgtatgcatatgcactgtatgta 384
Query: 185 tatggtgctcagaaatccagagagaacattgcatgcctaggaactggattacagacag 242
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 385 tatggtgctcagaaatccagagagaacattgcatgcctaggaacaagattatagacag 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no390_i08.g1 MSMg01no390_i08.g1 CHROMAT_FILE:
MSMg01no390_i08.g1 PHD_FILE: MSMg01no390_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:27 2005
(457 letters)
>mm_chr8_61324255_61325111
Length = 857
Score = 733 bits (379), Expect = 0.0
Identities = 436/455 (95%), Gaps = 1/455 (0%)
Strand = Plus / Minus
Query: 1 ccaggtggggcagtctttgaatggccctttcttccgactctgctccacactatctcttcg 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 455 ccaggtggggcagtctttgaatggcccttccttccgactctgctccacactatctcttcg 396
Query: 61 tatttgcttccctgagttagtcttttacatgtttgatttttactgcctctcattattaga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 395 tatttgcttccctgagttagtcttttacatgtttgatttttactgcctctcactattaga 336
Query: 121 aaatttcagaatccagagttcttcgggcacaaaaatagggctcttatctaaatactgata 180
||||||||||||||||||||||| |||||||||||||||||||| || |||||||||| |
Sbjct: 335 aaatttcagaatccagagttctttgggcacaaaaatagggctctcatttaaatactgaca 276
Query: 181 acatttaataatatattatctatttcaaataaaataatggatctttcgttactgagtaat 240
|||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 275 acatttaataatatattatctatttcaagtaaaataatggatctttcattactgagtaat 216
Query: 241 attgtcaatttttttttgccatcacacatgatgatctgtttcatccctgataccctcagt 300
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 attgtcaatccttgattgccatcacacatgatgatctgtttcatccctgataccctcagt 156
Query: 301 aattagaaggacagaactgattcctgcaagttgtccttccatctacacatatattccatg 360
|||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 155 aattagaaggacagaactgattccagcaagttgtccttccatctacatatatattccatg 96
Query: 361 gatggtttacacagtacccaaaaattaataaataaatgtaaaaatatgcattctagttta 420
||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 95 gatggtttacacagtacccaaaaattaataaatgcatgtaaaaatatgtattctagttta 36
Query: 421 tatctctgattggctttataatat-ctaagtttaa 454
||||||||||||| |||||||||| ||||||||||
Sbjct: 35 tatctctgattggttttataatattctaagtttaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
