NNNAACTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCAAGGCCCATTTCCAAACATAATAAAAGCAATCTACAGCA
AACCAGTAGCCAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCCA
CTAAAATCAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAA
CATAGTACTTGAAGTATTAGCCAGAGCAATTCGACAACAAAAGGAGATCA
AGGGGATACAAATTGGAAAAGAGGAAGTCAAAATATCACTTTTTGCAGAT
GATATGATAGTATATATAAGTGACCCTAAAAATTCCACCAGAGAACTCCT
AAACCTGATAAACAGCTTTGGTGAAGTAGCTGGATATAAAATTAACTCAA
ACAAGTCAATGGCCTTTCTCTACACAAAGAATAAACAGGCTGAGAAAGAA
ATTAGGGAAACAACACCGTTCTCAATAGTCACAAATAATATAAAATATCT
CGGCGTGACTCTAACTAAGGAAGTAAAAGATCTGTATGATAAAAACTTCA
AGTCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAGATCTC
CCATGCTCATGGATTGGCAGGATCAACATTGGTAAAATGGCTATCTTGCC
AAAAGCACTCTACAGATTCCATGCAATCCCCATCAAAATTCCCACTCCAT
TCCTCACCGAATTAAAAGGAGCAATTTGCAAATTCCTCCGGGATAACAAN

NNNAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTGAGTTCAAGACCAGCCTGGTC
TACAGAGTGAGTTTCAGGATAACCAGGGCTAACCCTGTCTTGAAAAACAA
AAAACAAACAAGCAAACAAGCAAACAAAGAACCCCACACACACACCAAAG
GTCAACGAAGTTTATTATCTGAAATACTTATGCACTTAATAACTTTGTAT
TTTTAGATATAAAAATGTTTTTTATAAATGCACACCTTGACAAGTGTTGG
CTGTAGTATTCCTCATTAGAAGAATTCTTTATATGCTGGAAGATTGTTTT
AGCAACAGAACATCCATTAAACATATAACCCACTGTATGCTTTTTGTTTG
TTTGCTTGTTTTTGTTTTTTTATTAGATATTTTCTTTATTTACATTTAAA
CCAGTGGCCAACTGTATTCTAAGGATCAGAAATTCATAAGGACAGGATGC
CTCAGTGGAAGACTGACAAGAGTTAGGGTGATGTTTTCAGTGATTTATAT
CACTGTCCACATTGTGCCATGGTTTGAAACAGAACACACACACACACACA
CACACACATACACACACACACAAACACACATACTCCTACACACACACACA
CACACACACACACTAATGCTGACACCGTCCCTGATAAATATATAAAAATG
AAGTATAGGAATTTATTTCTTATTAGAGTTTTGAAAG

Query= MSMg01no390_j05.g1 MSMg01no390_j05.g1 CHROMAT_FILE:
MSMg01no390_j05.g1 PHD_FILE: MSMg01no390_j05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:32 2005
         (551 letters)



>mm_chr8_58196736_58197686
          Length = 951

 Score = 1006 bits (520), Expect = 0.0
 Identities = 539/546 (98%), Gaps = 2/546 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgagttcaagaccagcctggtctacagagtgagtttcaggataaccagggctaaccctgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tgagttcaagaccagcctggtctacagagtgagtttcaggataaccagggctaaccctgt 546

                                                                       
Query: 61  cttgaaaaacaaaaaacaaacaagcaaacaagcaaacaaagaaccccacacacacaccaa 120
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 545 cttgaaaaacaaaaaacaaacaagcaaacaagcaaacaaagaaccacacacacacaccaa 486

                                                                       
Query: 121 aggtcaacgaagtttattatctgaaatacttatgcacttaataactttgtatttttagat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aggtcaacgaagtttattatctgaaatacttatgcacttaataactttgtatttttagat 426

                                                                       
Query: 181 ataaaaatgttttttataaatgcacaccttgacaagtgttggctgtagtattcctcatta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ataaaaatgttttttataaatgcacaccttgacaagtgttggctgtagtattcctcatta 366

                                                                       
Query: 241 gaagaattctttatatgctggaagattgttttagcaacagaacatccattaaacatataa 300
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gaagaattctttagatgctggaagattgttttagcaacagaacatccattaaacatataa 306

                                                                       
Query: 301 cccactgtatgctttttgtttgtttgcttgtttttgtttttttattagatattttcttta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 cccactgtatgctttttgtttgtttgcttgtttttgtttttttattagatattttcttta 246

                                                                       
Query: 361 tttacatttaaaccagtggccaactgtattctaaggatcagaaattcataaggacaggat 420
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tttacatttaaaccagtagccaactgtattctaaggatcagaaattcataaggacaggat 186

                                                                       
Query: 421 gcctcagtggaagactgacaagagttagggtgatgttttcagtgatttatatcactgtcc 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 185 gcctcagtggaagactgacaagagttagggtgatgttttcagtgatttatatcactttcc 126

                                                                       
Query: 481 acattgtgccatggtttgaaacagaacacacacacacacacacacacacatacacacaca 540
           |||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 125 acattgtgccgtggtttgaaacagaacacacacacacacacacacacaca--cacacaca 68

                 
Query: 541 cacaaa 546
           ||||||
Sbjct: 67  cacaaa 62


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space:   509081
Effective search space used:   509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)