XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACACAA
ATGCACTGGATGCTTTGCCTCTGTTGGGCCTTGCTCTATGACAAATATGT
CGGAGACAAAGCTTCTCACTCTCAGAGAGCTTATGTACAGGTGGAAGAAA
ATAATAACATACTGTGAACAACTGTGAAACAAATGCCTGCCACTGAAGAA
AACCCACTCACTCTCCTGGTTCCCAATGCAACGTGTAAAATATCATGTTT
ACTTTTCCCAGAGGTAGAAGCACAGTAAATCTCTGATAAGTTGTAAGGAG
TAAGCCAAAGTAATATGTAATAAAGCAGTAGCCTATAAAAAGACCATTAC
TTCAGGTCTAAGTGGGCCTTAGTCTGCCTTACATCAAAAAACAATGAATA
AGAACTGTCCCTGTGTTTGCTTACAAAATAAAGGTGGTTTAAAATGAGGA
TCATTTGTTCAGATACTCAAGGGTCTTTAACACCAGAGGTTCTGGCAACA
TCAACCATCAAACACTTCAACATTTCCTCCTGTGCCCTTGTGAGAAAAAA
GTGGCATAAGGCAACTTCTCTGCTGTCACACACAGGTGGACATAGTGAAC
TTGAGGACATACTGTTACTTGGAAATAGCACTGAACTACCATCTCCCTCC
CAGGCTCCGCCCATCCTTCTACTTCTATGATAAGAGGGCCGATGAAAAAC
ATTTACATACTTTCTAAATCTTCAAAGAAAAAATGTTTTCCAAATCCTAA
CTTTTGTTAAAAATTCCCCCAACCCCTGN

TTTTTCTCCTTTTTTTTTTTTCCCCCCNNNNNNNNNNNNNNNCCGATAAG
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXCTGTCTATGATCTATGTCTATATGTGTTTGTAGTGG
TATAGCCTTTACGCTTAATGTGTCCCTAAAAGCTTAATTTTTGTGGGCCT
TCTCCAAAAAACATTAAATTTTTGGTCCCCCCCCAAAAAAAAAAAATATG
GGGGTGGGGGTGTGGTAAAAAAATTTAAGTTNATAATTTATTTTTCCTTT
CTTTTGTGTTTCTTCTTTTCTTTTTTCTTTTCCCTTTTACCCCTTTTCCT
CCCCCCATTTTTTCTCTTCTTTTTTCTTTTTTTTTTTATCTCATGTTATT
TNAGTGCTTTTTTCTTCTTCCTTTTCTTCTTCTGTTTCCCATTATCGTTT
TCTCTTTTATCTTCTTCTTATAGTTTCCCCTTTTTATATTTCCCCTTAAA
TCTCTCCCCTATTTCAGAAGCCTTTCTCCA

Query= MSMg01no393_f12.b1 MSMg01no393_f12.b1 CHROMAT_FILE:
MSMg01no393_f12.b1 PHD_FILE: MSMg01no393_f12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:14 2005
         (541 letters)



>mm_chr8_7387012_7387951
          Length = 940

 Score =  994 bits (514), Expect = 0.0
 Identities = 532/538 (98%), Gaps = 1/538 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcacacaaatgcactggatgctttgcctctgttgggccttgctctatgacaaata 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ggaattcacacaaatgcactggatgctttgcctctgttgggccttgctctatgacaaata 681

                                                                       
Query: 64  tgtcggagacaaagcttctcactctcagagagcttatgtacaggtggaagaaaataataa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgtcggagacaaagcttctcactctcagagagcttatgtacaggtggaagaaaataataa 621

                                                                       
Query: 124 catactgtgaacaactgtgaaacaaatgcctgccactgaagaaaacccactcactctcct 183
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 620 catactgtgaacaactgtgaaacaaatgcctgccactgaagaaaacccactcactc-cct 562

                                                                       
Query: 184 ggttcccaatgcaacgtgtaaaatatcatgtttacttttcccagaggtagaagcacagta 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggttcccaatgcaacgtgtaaaatatcatgtttacttttcccagaggtagaagcacagta 502

                                                                       
Query: 244 aatctctgataagttgtaaggagtaagccaaagtaatatgtaataaagcagtagcctata 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatctctgataagttgtaaggagtaagccaaagtaatatgtaataaagcagtagcctata 442

                                                                       
Query: 304 aaaagaccattacttcaggtctaagtgggccttagtctgccttacatcaaaaaacaatga 363
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 aaaagaccattacttcaggtctaagtggcccttagtctgccttacatcaaaaaacaatga 382

                                                                       
Query: 364 ataagaactgtccctgtgtttgcttacaaaataaaggtggtttaaaatgaggatcatttg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 ataagaactgtccctgtgtttgcttacaaaataaaggtggtttaaaatgaggatcatgtg 322

                                                                       
Query: 424 ttcagatactcaagggtctttaacaccagaggttctggcaacatcaaccatcaaacactt 483
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 321 ttcagatactcaagggtctttaacaccagaggttctggaaacatcaaccatcaaatactt 262

                                                                     
Query: 484 caacatttcctcctgtgcccttgtgagaaaaaagtggcataaggcaacttctctgctg 541
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 caacatttcctcctgtgcccttgtgagaaaaaagtggcataaggcaacttttctgctg 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 940
Length adjustment: 10
Effective length of query: 531
Effective length of database: 930
Effective search space:   493830
Effective search space used:   493830
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)