TGCGGCCGCTATACGACTCCTATTTTCAGAGGATCCGCGGAATTCTACTC
TTTTCTCCTGTTTCTTACAGCCCTAAAGTCATATAAAGACAATTCATAAA
TGTATTTATTTTATTATATAATTTATTTTAATGTTTTGAGAATTTCATAC
ATGGGTATTGTGTTTACAACACTTCTGCCCCCTCCTCTTTTACTCCCAAC
TTCTGTACCTCCCAACTGCCTCTCAGAGTATCGACTTCTTTATTTGTTAC
TGTTACATAACACACATACACACTCACACATGGACAAACACACACATACT
CACACATGCCCAAACATATTCATACACACATGCACAAACACACTCACATA
CACACACTCACACATACACACACACACATGCACACACACACTCAAATGTA
CACACATGTACACATGTACACACACACACACAGAGGCAGGCAGGCAGGCA
GACAGACAGACAGACAGACAGACAGACAAACAGACACACACACACACACA
CACACAGTCCTGAGTCCATTTAGTGTTCTTCTCATGCATATGTGTGTTTA
AGGCTGACCACCTGGGATTAGATAACCTATGGGAGGCTCGTTCCTAGAGA
TTCCTCTTTCCTTATCAGNCATTAGCTCTTCATCTAAGTGGGGCCCTCTG
CTATTCTCCCAATCACATTGATATGTCTATTGATGTTGGATTATGCAGAC
CGGAATTGGGCCACTGGATTGTGTATATGTATTAACACTGA

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTTACCTGAGGAATGCCAAATGGCTGAGAAGCACCT
GAAAAAATGTTCAGCATCCTTAATCATCAGAGAAATGCAAATCAAAGCAA
CCCTGAGATTCCACCTCACACCAGTTGTTGGAGACCATACCATGAGAAAG
TAAGCCTTTCACAGTTTCCCACCCTAATAAGCCAAATGGCCTTGTGTTGG
GAGCTGGTCACCTCCTCCTCCCTATCCCTTCCTGGCACCTAAGACCCTAA
AAAGTTGAATTATTTTCCCCTCTTCCTTATCTCTTCCTGACTCCCAAGAC
TTCTAAGGACATGAGTTATGCGCTGAGCCCAGCTTGACACCCAGGGCTGT
TAAGGAAGAATCTACATTCCAGAGATAAGACCCAGGATGCCTCCCGCCTG
CAGTCTGAATTCAGCCTTCATGTCCCCAGATGCCTACTTCTTTGTTCTTT
GTTAATTCCTCCTCAGCCCCTCCCTATTTTCTCTCACTGTGTGCTTATAA
CCTGGCTTTTTCAGCCAAATAAACTTAGACCTTGACAGGAATCCTCCTTG
GTCTCTCTCTTTTTTCCTACCTATTTCTCTTGCAGGTTTGCAGTTCCCCT
TGTACCCATGAATAACTGGGTTCTGCTGGTCAGAACCAGTCAGAATGGCT
AAGATCAAAAATCAGGTGAAAGCAGATGCTGGCGA

Query= MSMg01no396_c15.b1 MSMg01no396_c15.b1 CHROMAT_FILE:
MSMg01no396_c15.b1 PHD_FILE: MSMg01no396_c15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:14 2005
         (523 letters)



>mm_chr8_9758169_9759091
          Length = 923

 Score =  895 bits (463), Expect = 0.0
 Identities = 499/519 (96%), Gaps = 17/519 (3%)
 Strand = Plus / Minus

                                                                       
Query: 5   ggaattctactcttttctcctgtttcttacagccctaaagtcatataaagacaattcata 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ggaattctactctttt-tcctgtttcttacagccctaaagtcatataaagacaattcata 460

                                                                       
Query: 65  aatgtatttattttattatataatttattttaatgttttgagaatttcatacatgggtat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aatgtatttattttattatataatttattttaatgttttgagaatttcatacatgggtat 400

                                                                       
Query: 125 tgtgtttacaacacttctgccccctcctcttttactcccaacttctgtacctcccaactg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tgtgtttacaacacttctgccccctcctcttttactcccaacttctgtacctcccaactg 340

                                                                       
Query: 185 cctctcagagtatcgacttctttatttgttactgttacataacacacatacacactcaca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 cctctcagagtatcgacttctttatttgttactgttacataacacacatacacactcaca 280

                                                                       
Query: 245 catggacaaacacacacatactcacacatgcccaaacatattcatacacacatgcacaaa 304
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 279 catggacaaacacacacatactaacacatgcccaaacatattcatacacacatgcacaaa 220

                                                                       
Query: 305 cacactcacatacacacactcacacatacacacacacacatgcacacacacactcaaatg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 cacactcacatacacacactcacacatacacacacacacatgcacacacacactcaaatg 160

                                                                       
Query: 365 tacacacatgtacacatgt--acacacacacacacag--------aggcaggcaggcagg 414
            ||||||||||||||||||  ||||||||||||||||        |||||||||||||||
Sbjct: 159 cacacacatgtacacatgtacacacacacacacacagaggcaggcaggcaggcaggcagg 100

                                                                       
Query: 415 cagacagacagacagacagacagacagaca-----a-acagacacacacacacacacaca 468
           ||||||||||||||||||||||||||||||     | ||| |||||||||||||||||||
Sbjct: 99  cagacagacagacagacagacagacagacacacacacacacacacacacacacacacaca 40

                                                  
Query: 469 cacagtcctgagtccatttagtgttcttctcatgcatat 507
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 39  cacagtcctgagtccatttagtgttcttctcatgcatat 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 108
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space:   468369
Effective search space used:   468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)