XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGGATCCGCGGAATTCAT
CAGAGTTTTCCTGTGAGGGTAAATGAATAGTCAGAGTCAAAGAATGTCAA
CTCACACCCCTCAAGGAAGCCTCTTAGCTGCTACATACAGAGAAGGCATT
TTTTACCCTCCTTGATGGTATGACTTTCATGTTTAATATGCCCATTAGTT
ACTTTCTCAGCACTGTAAATAAATATCTGACAAAATTCAATGTTGGAGAG
GTGAGATACATTTCAGCTCATGGTTTAAAAGAATACCATCTTTCATGGTG
ATGGGTCTCCCCACCTGTAAGTGATGGGCTGCTGTGTAACAACTCAGTAA
ACCAGAAAGAAACCAACAAGAAATAGAGCTTATCTATAACCATTAAAGTA
TACCAACTCAGTTTCCAACTGACCCAGTTCCTCTAGATAGGAGAAACGAA
AAGTTTCCTGTTCCCTAGAAGTTCCCCAACCCCCCAAATGAGTACCACCA
GCTGAGGGCCCAGTTGTTCACACACAGGAGCCTGTGTGGAAAATTGTATA
ACCCCAACCACCACATTCCCTAAATGCACCCCCGGCCTGCATTTATTGGT
CCCCCCCTACCCCAAAAACTCCTAGCCAGCTGGCTTAGGAAATTTTGGTT
TATTTTGGGAACCCTTTTCCCCCCCCAAACCTTTTGTGAAAGAAGCCCCT
GTTTAAAAGGAGGCGCCCGGGTAAACCTTTTTGAATTTGGGCCCCCCCAC
ACAAAAACTTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXATTCCAGATACCAGAGCTGGAGAGATAGGGG
CTACTTGTGGCCATTGGAGCCCAGGTGATGCCACCAAGGGTCCTAGTTGC
TGGATCACAGGAGAAAATTCTTTAACTGCTTGCCCTACTTGGTTTTATAT
TCACTGTGACATGATTTTTTTTTTTTTTTTTTGCTATTCCTCTGTTTTGA
TATGGGAATATTTCATGTCATTGTATGTTGAAAGTATGCAACTGTTTCTT
TGATGTTATGGAATCATTTTTAAGAAACTGCCTATGTCTTAGAAGAGACT
TTGAGGATTTTAGAAAGTGTTAGAACTGTGGACTAGGGGGACTTTGGAAG
TTAGATGTATTTGCTTAATATGATGGCCATTATCCTCCATTGGACAGCTG
TGGTTTCAGTGTGAAATGTCTCTTACAGGTGTATGGCTTTTGGACACTTT
GTCTTTAATTAGCCTGAACCTTGGGCAGTTGACAAAACTATTTCTACTCC
TTTCTCTTTTCTCTCCCATAACTCATCACTCTTTCCTTCACCTTTATCCC
ACCCTTTCTTATTATTCTTTCCTCCTCCATTCCCCCTCTTCTACGCTTTT
TTTTCCTCCTTTATTCCCTCTCCTCCCCTCTCTCTTTTTCTTCATTCCCT
TGTTTCTTTCCCCTCTTTCCTCCCCCTCCTCCTATTCTCTTTTTTCCT

Query= MSMg01no396_k20.b1 MSMg01no396_k20.b1 CHROMAT_FILE:
MSMg01no396_k20.b1 PHD_FILE: MSMg01no396_k20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:52 2005
         (434 letters)



>mm_chr8_8050029_8050862
          Length = 834

 Score =  770 bits (398), Expect = 0.0
 Identities = 425/434 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagggtaaatgaatagtcagagtcaaagaatgtcaactcacacccctcaaggaagcctct 60
           ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 gagggcaaatgaatagtcagagtcaaagaatgtcaactcacacccctcacggaagcctct 260

                                                                       
Query: 61  tagctgctacatacagagaaggcattttttaccctccttgatggtatgactttcatgttt 120
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagctgctacataaagagaaggcattttttaccctccttgatggtatgactttcatgttt 320

                                                                       
Query: 121 aatatgcccattagttactttctcagcactgtaaataaatatctgacaaaattcaatgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatatgcccattagttactttctcagcactgtaaataaatatctgacaaaattcaatgtt 380

                                                                       
Query: 181 ggagaggtgagatacatttcagctcatggtttaaaagaataccatctttcatggtgatgg 240
           |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 381 ggagaggtgagatacatttcagctcatggtttaagagaataccacctttcatggtgatgg 440

                                                                       
Query: 241 gtctccccacctgtaagtgatgggctgctgtgtaacaactcagtaaaccagaaagaaacc 300
           ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 gtctccccacctggaagtgatgggctgctgtgtaacaactcagtaaagcagaaagaaacc 500

                                                                       
Query: 301 aacaagaaatagagcttatctataaccattaaagtataccaactcagtttccaactgacc 360
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aactagaaatagagcttatctataaccattaaagtataccaactcagtttccaactgacc 560

                                                                       
Query: 361 cagttcctctagataggagaaacgaaaagtttcctgttccctagaagttccccaaccccc 420
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 561 cagttcctctagataggagaaacgaaaagtttcctattccctagaagttccccaaccccc 620

                         
Query: 421 caaatgagtaccac 434
           ||||||||||||||
Sbjct: 621 caaatgagtaccac 634


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space:   350625
Effective search space used:   350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)