Query= MSMg01no397_b03.b1 MSMg01no397_b03.b1 CHROMAT_FILE:
MSMg01no397_b03.b1 PHD_FILE: MSMg01no397_b03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:22 2005
(414 letters)
>mm_chr8_9664485_9665298
Length = 814
Score = 731 bits (378), Expect = 0.0
Identities = 402/410 (98%)
Strand = Plus / Minus
Query: 5 gaattctttgtttatctctgagccccatttttaatggggttatttgattttctggagtcc 64
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 gaattctttgtttagctctgagccccatttttaatggggttatttgattttctggagtct 635
Query: 65 gccttcttgagttctttatcgtatcacttactctgcagatgcagacacaggtggaaagtc 124
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 gccttcttgagttctttattgtatcacttactctgcagatgcagacacaggtggaaagtc 575
Query: 125 ttgctacagaagtactggaaaagccaggatcatagataggctctttcttcagttggagct 184
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ttgctacagaggtactggaaaagccaggatcatagataggctctttcttcagttggagct 515
Query: 185 ccctggctatagcctatgggcttaatgctttagaacagcttccccgtttgaaggcagaat 244
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 514 ccctgtctatagcctatgggcttaatgctttagaacagcttccctgtttgaaggcagaat 455
Query: 245 gtcccttgtaccgtgtgtaatcagggcctctgcctagacttgatactgttcctagcactc 304
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gtcccttgtatcgtgtgtaatcagggcctctgcctagacttgatactgttcctagcactc 395
Query: 305 ctgtggtactaattgtgtaaatggggcaggacaaaaagctatgggctaaattgtttattc 364
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 394 ctgtggtactaattgtgtaaatggggcaggacaaaaatctatgggctaaattgtttattc 335
Query: 365 aagggtgtctagggacaaggactgtttggggtgagatgagggaaatacgt 414
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aagggtgtctagggacaaggactgtttggggtgagatgagggaaatacgt 285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no397_b03.g1 MSMg01no397_b03.g1 CHROMAT_FILE:
MSMg01no397_b03.g1 PHD_FILE: MSMg01no397_b03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:22 2005
(365 letters)
>mm_chr8_9470153_9470917
Length = 765
Score = 706 bits (365), Expect = 0.0
Identities = 365/365 (100%)
Strand = Plus / Plus
Query: 1 caagctacagttctcagcacttgccctgacccattaacagccgtcagtacagtctgcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagctacagttctcagcacttgccctgacccattaacagccgtcagtacagtctgcaga 260
Query: 61 tacagacagatcacagcaacacaggtgagacatctcagacatttcagaacctttggggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacagacagatcacagcaacacaggtgagacatctcagacatttcagaacctttggggtc 320
Query: 121 agatagcaatgaacacctttgcatgacagaagtccagactcactggcccaaccctttgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agatagcaatgaacacctttgcatgacagaagtccagactcactggcccaaccctttgga 380
Query: 181 agaagccctgctggggaattctaggtgctgagatatgtcaaccacatagttgcttctagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaagccctgctggggaattctaggtgctgagatatgtcaaccacatagttgcttctagg 440
Query: 241 tttcctgctgattcctgcagagctgggctggcctgcttctaaatggaaataaaacttgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttcctgctgattcctgcagagctgggctggcctgcttctaaatggaaataaaacttgtc 500
Query: 301 ctgatagtgtccagggagtgaaacaaaaactgtcatctaaattaagtcctcagtggagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgatagtgtccagggagtgaaacaaaaactgtcatctaaattaagtcctcagtggagga 560
Query: 361 gccat 365
|||||
Sbjct: 561 gccat 565
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 765
Length adjustment: 9
Effective length of query: 356
Effective length of database: 756
Effective search space: 269136
Effective search space used: 269136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
