Query= MSMg01no399_l12.b1 MSMg01no399_l12.b1 CHROMAT_FILE:
MSMg01no399_l12.b1 PHD_FILE: MSMg01no399_l12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:48 2005
(406 letters)
>mm_chr8_59939743_59940549
Length = 807
Score = 681 bits (352), Expect = 0.0
Identities = 388/400 (97%), Gaps = 1/400 (0%)
Strand = Plus / Plus
Query: 8 gaattccagatttactcgagaaaatgaaaatagtaagggtagtctttaccagcaactcca 67
||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattccagatgaattcaagaaaatgaaaatagtaagggtagtctttaccagcaactcca 267
Query: 68 ctccacatgtgtatgtgtgtatactatataatgcatacattatatattctaaagtataac 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ctccacatgtgtatgtgtgtatactatataatgcatacattatatattctaaagtataac 327
Query: 128 atagttttatataaatgtaaatatatatacacatatgaatatatttatcacctcatacca 187
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 328 atagttttatataaatgtaaacatatatacacatatgaatatatttatcacttcatacca 387
Query: 188 -atcaaagcaatgcaatgtgtggctcatatctgttgaatgaacaacaggctaaaagcaca 246
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gatcaaagcaatgcaatgtgtggctcatatctgttgaatgaacaacaggctaaaagcaca 447
Query: 247 tttttatcttgggcaaggacccgtagaagtctcactttatgccttttgtgtgtatgtata 306
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tttttatcttgggcaaggacctgtagaagtctcactttatgccttttgtgtgtatgtata 507
Query: 307 tgcatgtgcccatgtacatgacctgagtacagagaaggacattgggcatgccatctacca 366
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||
Sbjct: 508 tgcatgtgcccatgtacatgacctgagttcagaggaggacattgggcatgccatccacca 567
Query: 367 ctctcctcatcactctcttaagacagggtctctccaccat 406
|||||||||| |||||||||||||||||||||||||||||
Sbjct: 568 ctctcctcattactctcttaagacagggtctctccaccat 607
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 807
Length adjustment: 9
Effective length of query: 397
Effective length of database: 798
Effective search space: 316806
Effective search space used: 316806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no399_l12.g1 MSMg01no399_l12.g1 CHROMAT_FILE:
MSMg01no399_l12.g1 PHD_FILE: MSMg01no399_l12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:48 2005
(327 letters)
>mm_chr8_60105768_60106495
Length = 728
Score = 598 bits (309), Expect = e-175
Identities = 321/325 (98%), Gaps = 1/325 (0%)
Strand = Plus / Minus
Query: 1 agaattatggatacctcatgaatgtgttagacaaaaggggagggtttggagcaggatcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 agaattatggatacctcatgaatgtgttagacaaaaggggagggtttggagcaggatcct 466
Query: 61 cacagctgcatgcaatgttgctctgcaggcgacattgattccttgtggattcctgtgtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 cacagctgcatgcaatgttgctctgcaggcgacattgattccttgtggattcctgtgtct 406
Query: 121 tgtctctcctccaggtgcatctgtttcttatttatttta-ttttttgagttacggcactg 179
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 405 tgtctctcctccaggtgcatctgtttcttatttattttatttttttgagttacggcactg 346
Query: 180 aaggaagatggagcatgcttctatgccagagtaaaaaatattttttagtaagttttgttt 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gaggaagatggagcatgcttctatgccagagtaaaaaatattttttagtaagttttgttt 286
Query: 240 ccgtatctgacttcctaatcacctttcttcttcacagaaaggagtctttaattgtgatat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ccgtatctgacttcctaatcacctttcttcttcacagaaaggagtctttaattgtgatat 226
Query: 300 gcggtgtgaggtaaccgtctttgga 324
| ||||||||| |||||||||||||
Sbjct: 225 gtggtgtgagggaaccgtctttgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 728
Length adjustment: 9
Effective length of query: 318
Effective length of database: 719
Effective search space: 228642
Effective search space used: 228642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
