CCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAAAGAGGATGCGC
GGAATTCTCAGTTTCTAAATCCTAATAAGACTGTTATATGGCCTGAACTT
CTCAATCAGGCTCTGAAAGCATGAAGCTAAATCCTAAAATGTTGGGGTAG
CCAAGACCCTGCAGGGAATATATTGAAGCGATTGGTGTTGGGGTTTTACC
AAGGAAGCTCTGTAGCATATCTTTTAGGCATACCACATATGTTTATACAT
TTATAAAAGCAGGCAAATAAAAATATACTCTAAACTTAGGTAGTGGTCAC
TACCTAGACAATCTTAGATTGACAAATATTTATTTATGATATGCATGAAA
AGATGTGGAATTCTTTAATGTCATTAGAGGAGTTGGGAGATGGTGCTGTG
AGTAAGAGTGCTAATACAACCATGAGGAAGTGAGTTTGAGTCTCTAGCAG
CCAAATAAAAAGCTAGACATGGCAGTGCACATCCCATTTGACCAAGTGCT
AGGAAAATGTAGAGCTAGGAGCATTACTCAAGCTTGCTGGGTAATGAGAG
AGTAGATGATGAGATGGGATGCCTGGCATCCTTCTTTGGCCTACACACAC
ACACGAGTAGGCACATGCCTCTGCGTGCGCGCACACACACATTTACTTTT
TCATACCCCTACCCCAAGATAAACTCCCCTATTTTCTTTCACCTGTCCCA
TACATCTAAACTCCGTTCTCCTATCCATTTTTTGCCCCACTCTCTCCCTC
CTCT

NCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAGAGGTTCTTAGCTAAGCTTAAA
GAGGGGCGTCTTTTAAAAAGTTTCTCATTGATATGTTGCAAAAGAAATGC
CACTTTTGAAGAAGCTCAAATTAAGTCTGACTTCAGCTTCTTGCCAAAAA
TTTCCCTTCCTGTCAATAACTTGTAAGGCCTTTGGATGTTATCCAATTCA
ACTGTCTTTGAAATTTACATTTTAGAATAACGTGTAAACAAAACTACAAA
ATAGAACTGGGGGATAGGCATATTATTGGGGTGATTGCCTCGGATGCAAA
AGGCACTAGCTACAATCCCAGAACCGTAAAACAAACAAACAAAAAGAGTC
ACTTCCTCTCTCTGGATATCTGTTTTCCTGCCCAAATATTGACTCATTAA
ATCCTAACACCTAGATTCTAGTTTATGTTTCACCTCTGGTTTTTCACCTT
GCTGAGAACTTACCACAGTGGTGCTTGCTGGCATGCGTGTTGCCTAGCGA
CCCCATGAAGGTAGGGCCTCTTATTTACTGTGCTGGACACTCCGAAGTTT
GCACTGTATAACATTCCTGCATCTTAACTTGTTATGTTGAAGACTCCAGA
AAGTCAAAATTTTTCACACCCATAATCTCCATTTCTAATANAGAGATGAG
AGGAGTTACTGCTTTCTTGGGATATCTGGTAAAGCAATGCACAGGTAATG
GGGGGAACTT

Query= MSMg01no401_e12.b1 MSMg01no401_e12.b1 CHROMAT_FILE:
MSMg01no401_e12.b1 PHD_FILE: MSMg01no401_e12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:52 2005
         (530 letters)



>mm_chr8_115293940_115294869
          Length = 930

 Score =  961 bits (497), Expect = 0.0
 Identities = 506/509 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcctaataagactgttatatggcctgaacttctcaatcaggctctgaaagcatgaagcta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tcctaataagactgttatatggcctgaacttctcaatcaggctctgaaagcatgaagcta 450

                                                                       
Query: 61  aatcctaaaatgttggggtagccaagaccctgcagggaatatattgaagcgattggtgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aatcctaaaatgttggggtagccaagaccctgcagggaatatattgaagcgattggtgtt 390

                                                                       
Query: 121 ggggttttaccaaggaagctctgtagcatatcttttaggcataccacatatgtttataca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ggggttttaccaaggaagctctgtagcatatcttttaggcataccacatatgtttataca 330

                                                                       
Query: 181 tttataaaagcaggcaaataaaaatatactctaaacttaggtagtggtcactacctagac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tttataaaagcaggcaaataaaaatatactctaaacttaggtagtggtcactacctagac 270

                                                                       
Query: 241 aatcttagattgacaaatatttatttatgatatgcatgaaaagatgtggaattctttaat 300
           |||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 269 aatcttagagagacaaatatttatttatgatatgcatgaaaatatgtggaattctttaat 210

                                                                       
Query: 301 gtcattagaggagttgggagatggtgctgtgagtaagagtgctaatacaaccatgaggaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gtcattagaggagttgggagatggtgctgtgagtaagagtgctaatacaaccatgaggaa 150

                                                                       
Query: 361 gtgagtttgagtctctagcagccaaataaaaagctagacatggcagtgcacatcccattt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 gtgagtttgagtctctagcagccaaataaaaagctagacatggcagtgcacatcccattt 90

                                                                       
Query: 421 gaccaagtgctaggaaaatgtagagctaggagcattactcaagcttgctgggtaatgaga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89  gaccaagtgctaggaaaatgtagagctaggagcattactcaagcttgctgggtaatgaga 30

                                        
Query: 481 gagtagatgatgagatgggatgcctggca 509
           |||||||||||||||||||||||||||||
Sbjct: 29  gagtagatgatgagatgggatgcctggca 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space:   478400
Effective search space used:   478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no401_e12.g1 MSMg01no401_e12.g1 CHROMAT_FILE:
MSMg01no401_e12.g1 PHD_FILE: MSMg01no401_e12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:52 2005
         (556 letters)



>mm_chr8_115079297_115080252
          Length = 956

 Score = 1006 bits (520), Expect = 0.0
 Identities = 547/556 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagaggttcttagctaagcttaaagaggggcgtcttttaaaaagtttctcattgatatgt 60
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 aagaggttcttagctaagcttaaagaggggcatcttttaaaaagtttctcattgatatgt 260

                                                                       
Query: 61  tgcaaaagaaatgccacttttgaagaagctcaaattaagtctgacttcagcttcttgcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcaaaagaaatgccacttttgaagaagctcaaattaagtctgacttcagcttcttgcca 320

                                                                       
Query: 121 aaaatttcccttcctgtcaataacttgtaaggcctttggatgttatccaattcaactgtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaatttcccttcctgtcaataacttgtaaggcctttggatgttatccaattcaactgtc 380

                                                                       
Query: 181 tttgaaatttacattttagaataacgtgtaaacaaaactacaaaatagaactgggggata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttgaaatttacattttagaataacgtgtaaacaaaactacaaaatagaactgggggata 440

                                                                       
Query: 241 ggcatattattggggtgattgcctcggatgcaaaaggcactagctacaatcccagaaccg 300
           |||| |  | ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcacagcagtggagtgattgcctcggatgcaaaaggcactagctacaatcccagaaccg 500

                                                                       
Query: 301 taaaacaaacaaacaaaaagagtcacttcctctctctggatatctgttttcctgcccaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaaacaaacaaacaaaaagagtcacttcctctctctggatatctgttttcctgcccaaa 560

                                                                       
Query: 361 tattgactcattaaatcctaacacctagattctagtttatgtttcacctctggtttttca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tattgactcattaaatcctaacacctagattctagtttatgtttcacctctggtttttca 620

                                                                       
Query: 421 ccttgctgagaacttaccacagtggtgcttgctggcatgcgtgttgcctagcgaccccat 480
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 621 ccttgctgagaacttaccacagtggtgcttgctggcatgcatgttgcctagcgaccccat 680

                                                                       
Query: 481 gaaggtagggcctcttatttactgtgctggacactccgaagtttgcactgtataacattc 540
           ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 681 gaaggtaggacctcttatttactgtgctggacactccgaagtttgctctgtataacattc 740

                           
Query: 541 ctgcatcttaacttgt 556
           ||||||||||||||||
Sbjct: 741 ctgcatcttaacttgt 756


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space:   516516
Effective search space used:   516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)