Query= MSMg01no402_m04.b1 MSMg01no402_m04.b1 CHROMAT_FILE:
MSMg01no402_m04.b1 PHD_FILE: MSMg01no402_m04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:46 2005
(249 letters)
>mm_chr8_110996559_110997207
Length = 649
Score = 466 bits (241), Expect = e-136
Identities = 247/249 (99%)
Strand = Plus / Plus
Query: 1 acacctgcaataaggcaaggtattgagtctcatgtctttgatctatcacatacttagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acacctgcaataaggcaaggtattgagtctcatgtctttgatctatcacatacttagaaa 260
Query: 61 tagtccccagtgattttatggcgggacagggggtatatgctcatttagcaaagggaagat 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 tagtccccagtgattttatggcggaacagggggtatatgctcatttagcaaagggaagat 320
Query: 121 ccagagatgtcatggttagctgcttaatatcgggccatctagcctttaaaacaagcatca 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccagagatgccatggttagctgcttaatatcgggccatctagcctttaaaacaagcatca 380
Query: 181 tttgggagaccaagatttccacaaaccacctttgaggatgatcccagaaaacagtcaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttgggagaccaagatttccacaaaccacctttgaggatgatcccagaaaacagtcaaga 440
Query: 241 gcccattta 249
|||||||||
Sbjct: 441 gcccattta 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no402_m04.g1 MSMg01no402_m04.g1 CHROMAT_FILE:
MSMg01no402_m04.g1 PHD_FILE: MSMg01no402_m04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:46 2005
(365 letters)
>mm_chr8_111177108_111177871
Length = 764
Score = 588 bits (304), Expect = e-172
Identities = 328/336 (97%), Gaps = 2/336 (0%)
Strand = Plus / Minus
Query: 30 ttctgtgagatcccactttcccaacagactgaaaagtaagttcagagctatcctaggcta 89
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 764 ttctgtgagatcccactttcccaacagactgaaaagtaggttcagagctatcct-ggcta 706
Query: 90 tttgaggctcttcccatgaatgtggagtccaaaggacagcttgcaggagttggttctttt 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 tttgaggctcttcccatgaatgtggagtccaaaggacagcttgcaggagttggttctttt 646
Query: 150 actgtggggttccagggattgaacttaggtctttaggtttggtggcaagcacctttcccc 209
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 645 actgtggggttccagggattgaacttaggtctttaggtttggtggcaggtacctttcccc 586
Query: 210 actgagccatctcaccagccctctcttttctttttttctcaagtgactcatcttctgagt 269
|||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||
Sbjct: 585 actgagccatctcaccagccctctcttttc-ttttttctcatgtgactcattttctgagt 527
Query: 270 acattttgtaatgatttcacactgtggccgatgaagaagttagaatttcatttaccgaag 329
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 526 acattttgtaatgatttcacactgtggtcgatgaagaagttagaatttcatttaccgaag 467
Query: 330 tgactttttaatattcttcgtcagccatcccttaag 365
||||||||||||||||||||||||||||||||||||
Sbjct: 466 tgactttttaatattcttcgtcagccatcccttaag 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 764
Length adjustment: 9
Effective length of query: 356
Effective length of database: 755
Effective search space: 268780
Effective search space used: 268780
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
