Query= MSMg01no403_k06.b1 MSMg01no403_k06.b1 CHROMAT_FILE:
MSMg01no403_k06.b1 PHD_FILE: MSMg01no403_k06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:00 2005
(462 letters)
>mm_chr8_11200440_11201302
Length = 863
Score = 841 bits (435), Expect = 0.0
Identities = 453/459 (98%), Gaps = 1/459 (0%)
Strand = Plus / Plus
Query: 5 gaattctcacctttgattggtacttatcaaatccaactaaacgttgaggtcgctcaccac 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcacctctgattggtacttatcaaatccaactaaacgttgaggtcgctcaccac 264
Query: 65 atggaagaacatcttgtcctgaacttgaaggagcttaccctacaaattccattacaaatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atggaagaacatcttgtcctgaacttgaaggagcttaccctacaaattccattacaaatt 324
Query: 125 ccagctttaaggg-aaaaaaatctaattgtgtttaaggaggcagtttggttcattatacc 183
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 325 ccagctttaagggaaaaaaaatctaattctgtttaaggaggcagtttggttcattatacc 384
Query: 184 aggctgctggttccaagcaaaaatcccattttcggctattaaccttataacgaagcccac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggctgctggttccaagcaaaaatcccattttcggctattaaccttataacgaagcccac 444
Query: 244 cccagccccggctgaggggtaagaagcagactctaatttccataactaaactagactgtt 303
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 445 cccagccccggctgaggggtaaggagcagactctaatttccataactaaactagactgtt 504
Query: 304 tgctaatgctgcatctgacaatttcccatatcctagctgttgagcacatgatacttcggg 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 505 tgctaatgctgcatctgacaatttcccatatcctagctgttgagcacatgatactttggg 564
Query: 364 atgtttagcaaatgacctgatctgaaaaacaagatagctgcagaattcctcacggcagcc 423
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 565 atgtttagcaaatgacctgatctgaaaaacaggatagctgcagaattcctcacggcagcc 624
Query: 424 tccaaaacagagaagacagagaggattgtctgcaggaga 462
|||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tccaaaacagagaagacagagaggattgtctgcaggaga 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 863
Length adjustment: 10
Effective length of query: 452
Effective length of database: 853
Effective search space: 385556
Effective search space used: 385556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no403_k06.g1 MSMg01no403_k06.g1 CHROMAT_FILE:
MSMg01no403_k06.g1 PHD_FILE: MSMg01no403_k06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:00 2005
(337 letters)
>mm_chr8_11373987_11374723
Length = 737
Score = 619 bits (320), Expect = 0.0
Identities = 332/336 (98%)
Strand = Plus / Minus
Query: 1 cagtcacatgacctcatccagctcaggactttctggatgtctgagtggcttttcctcatg 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 536 cagtcacatgacctcatccagctcaggactttctggatgtctgagaggcttttcctcatg 477
Query: 61 acatacaaaggccagctatagtggcacacttggtgtgtttgggtattgagatggtccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 acatacaaaggccagctatagtggcacacttggtgtgtttgggtattgagatggtccatt 417
Query: 121 caagtaagttttctgggcaaaggtctttcccagggaaaatccaacctcctcgcttctgca 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 416 caagtaagttttctgggcaaaggtctttcccagggaacatccaacctcctcgcttctgca 357
Query: 181 cctttagcagaacccttcgtagaagccctggacccagaaggccgcacagagggccggctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 cctttagcagaacccttcgtagaagccctggacccagaaggccgcacagagggccggctt 297
Query: 241 cctgttattagtgagatgtgtgtatcacagaccaggaccttccttcctgtgaagatgctt 300
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 cctgtgatgagtgagatgtgtgtatcacagaccaggaccttccttcctgtgaagatgctt 237
Query: 301 acacaacgatgctcactgggtctgagagctaataca 336
||||||||||||||||||||||||||||||||||||
Sbjct: 236 acacaacgatgctcactgggtctgagagctaataca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
