XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATG
TCCTTGCCCTCTTACTGAGGAAACAGTCAGGTTTGCAGTTTGTAAATTTT
GTAGCACTGAGAATCAAATCCAGGGCCTTGCATAAACCGTATCAGGGTAA
GTCAGTGTAAAACTCTGTACTTGTGTGTGTGTGTGTGTGTCTTAAGTGTG
TTTCTTTAAATCTTTCTCATAGCTTCTTACCGTCATGTTCAGCTACACTA
TCGCAATCACAAGTATAAGGATCACTGTTCTTGCGTATTTTTAGATTAAC
CTTACATAGTCCATTCTAACATCCTTCGTAGTCCATAAAGGTAGGTAAAT
AATGATGTATCTATCAAACAGGGTGAGCATACATGTAGTCCAGTTGAGCC
TTAATTTTTTATTAACTAATTTAGTTACTTTTCATCCGAACAGAGTTTCC
TGACCCTCCCCTCCTCCCAGTCCTTGCCCCTCATCATCCCCTCCCCCATC
CACTTCTCTGTTTCTCTTCAGAAAAGGAGAGCCTTCTCATGGATCTCAAG
TACCCCTGGCTTATCAAGTTGTTATAAGAACCAAGAATACTCTTTTCTAA
TTGAGGTTATACTAATGTTGCCCAGTTAGAAAGAAATGTCTCCCCCAATA
TTGGGCAAAATCCTCCCAAAAAATTCTGTTTCCCAACTGTTTTTTAATAG
CCCTATATAAAAAACCAACCTTGTTCATATTGTAACCTGGGGTATGAAAT
AATTCTCCTTACCCGACCCCCCTGTCTATTATTTCTTGTGTTA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXACTCTGTAGAAGAGACTGCTCTGGAACTCAGAGA
AATTTGCCTGTCTCTGCCTCCTGAGTGAGATTAAAGGCATGTGCCACCAC
TGCCCCAGAAACCATGGATGGATAGATAGATAGATAGATAGATAGATAGA
TAGATAGATAGATAGATAGATAGATANATGTTTTTNTTTATGTTTTTTTT
TTTTACTCTTTTCTTTCGTTTCATTATTTATCTTTTTTCCCTTCTTTTCT
CGTCTCCTTTTTTTTTTTTTTCCTCTGTTCATCACCTCTGTTTCAACTCC
CTTTTCTTCCTCCCTACCCGCCCCCCGCCATTATTTTATACCTCCTCAAT
ATTTTATCTCCCCCTCCTCAATATTTCTATTACTTCTTAACCCTCCTTAT
TTTATACCCCTCCTTTCTCTTATTTATCTCCCTAATTTTTTTACCCCTTT
TTCTTTTTTATATCCCCCCCTTTCTTTATATTCCCCCCTCTATTTCTTCC
CCTCTTTTTACCTCTTTATCATATCTCTCTTTTAATTCTTTATTACCTTC
TCTTTAACCTTTTCTTATTTTTTCTCTCTCCTCTAATCTTCTTCTCCTCC
CCTTTTTTATTACCTTTTAATTTCTATCTCACTCACTATCCCACCCCTCT
CCTATATTTATCTTCTTCCCCTTCCTCTCTCCCCTATTTTTCTTCCTCAT
CTTTTCTCATCTGTCTTTCGTCTCCTACACCTCTCTCTTATATATTAATT
TTTAACCGCCCTTCCCATATCATATAACACTTATACATTCTCTCTCTCTC
TTTCTCTATCN

Query= MSMg01no404_f16.b1 MSMg01no404_f16.b1 CHROMAT_FILE:
MSMg01no404_f16.b1 PHD_FILE: MSMg01no404_f16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:00 2005
         (485 letters)



>mm_chr8_63552221_63553103
          Length = 883

 Score =  895 bits (463), Expect = 0.0
 Identities = 476/481 (98%), Gaps = 2/481 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcatgtccttgccctcttactgaggaaacagtcaggtttgcagtttgtaaattttg 64
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgtccttgggctcttactgaggaaacagtcaggtttgcagtttgtaaattttg 264

                                                                       
Query: 65  tagcactgagaatcaaatccagggccttgcataaaccgtatcagggtaagtcagtgtaaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tagcactgagaatcaaatccagggccttgcataaaccgtatcagggtaagtcagtgtaaa 324

                                                                       
Query: 125 actctgtacttgtgtgtgtgtgtgtgtgtcttaagtgtgtttctttaaatctttctcata 184
           |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||
Sbjct: 325 actctgtacttgtgtgtgtgtgtgtgt--cttaagtgtgtttctttaaatctttctcata 382

                                                                       
Query: 185 gcttcttaccgtcatgttcagctacactatcgcaatcacaagtataaggatcactgttct 244
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 383 gcttcttaccgtcatgttcagctacactatcacaatcacaagtataaggatcactgttct 442

                                                                       
Query: 245 tgcgtatttttagattaaccttacatagtccattctaacatccttcgtagtccataaagg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgcgtatttttagattaaccttacatagtccattctaacatccttcgtagtccataaagg 502

                                                                       
Query: 305 taggtaaataatgatgtatctatcaaacagggtgagcatacatgtagtccagttgagcct 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 taggtaaataatgatgtatctatcaaacagggtgagcatacatgtagtccagttgagcct 562

                                                                       
Query: 365 taattttttattaactaatttagttacttttcatccgaacagagtttcctgaccctcccc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 taattttttattaactaatttagttacttttcatccgaacagagtttcctgaccctcccc 622

                                                                       
Query: 425 tcctcccagtccttgcccctcatcatcccctcccccatccacttctctgtttctcttcag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tcctcccagtccttgcccctcatcatcccctcccccatccacttctctgtttctcttcag 682

            
Query: 485 a 485
           |
Sbjct: 683 a 683


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 883
Length adjustment: 10
Effective length of query: 475
Effective length of database: 873
Effective search space:   414675
Effective search space used:   414675
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)