Query= MSMg01no405_j05.b1 MSMg01no405_j05.b1 CHROMAT_FILE:
MSMg01no405_j05.b1 PHD_FILE: MSMg01no405_j05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:36 2005
(239 letters)
>mm_chr8_100598689_100599327
Length = 639
Score = 445 bits (230), Expect = e-129
Identities = 236/238 (99%)
Strand = Plus / Plus
Query: 1 acacatattttgcttgtttcaatgaaagcaaactattataaaaccaatggtctcaatcat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 acacatattttgcttgtttcaatgaaagcaaactattataaaaccaatggtctccatcat 260
Query: 61 tctaccctttaagagataacttatttatttagcagtttaatagtatgatgccatcaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctaccctttaagagataacttatttatttagcagtttaatagtatgatgccatcaaata 320
Query: 121 actggcacattccaacatacattaaaattaaaatgttatgattattttgatgtcaacata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actggcacattccaacatacattaaaattaaaatgttatgattattttgatgtcaacata 380
Query: 181 tttgtatcccaaagttttcaggagagggagaggggaggggttatagggagggagaagg 238
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 tttgtatcccaaagttttcaggagagggagagggaaggggttatagggagggagaagg 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no405_j05.g1 MSMg01no405_j05.g1 CHROMAT_FILE:
MSMg01no405_j05.g1 PHD_FILE: MSMg01no405_j05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:36 2005
(338 letters)
>mm_chr8_100802926_100803662
Length = 737
Score = 584 bits (302), Expect = e-171
Identities = 325/338 (96%), Gaps = 10/338 (2%)
Strand = Plus / Minus
Query: 1 agtcagtacttcttaatctcagagccatctctttgtacctgaacacatttaaaaaaaata 60
||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 439 agtcagtacttcttaatttcagagccatctctttgtacctgaacacattaaaaaaaaata 380
Query: 61 atctgcattacctgtaagaatcacagggatggctataagctttggcaggattcaagagag 120
||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 379 ---------acctgtaagaatcacagggatggctataacctttggcaggattcaagagag 329
Query: 121 agtagctgataaggtccagagggatgaagagtgtgtgtggngagggtataattgcatatc 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 328 agtagctgataaggtccagagggatgaagagtgtgtgtgg-gagggtataattgcatatc 270
Query: 181 aaataaacattttaaaaatatatatgtaatagatatgtttatttaaaaatgcatttcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aaataaacattttaaaaatatatatgtaatagatatgtttatttaaaaatgcatttcaaa 210
Query: 241 attttagatttaagaacttaatttattaaaccatatcgagatatcaacacttaaaaacta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 attttagatttaagaacttaatttattaaaccatatcgagatatcaacacttaaaaacta 150
Query: 301 tatcttaatattaacagttgaaatataaatactctcag 338
||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tatcttaatattaacagttgaaatataaatactctcag 112
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 737
Length adjustment: 9
Effective length of query: 329
Effective length of database: 728
Effective search space: 239512
Effective search space used: 239512
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
